RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 Q6ZVL8 140 aa15.47■□□□□ 0.07
TPM1-228ENST00000560975 SYNDIG1Q9H7V2 258 aa15.47■□□□□ 0.07
TPM1-228ENST00000560975 POMT2Q9UKY4 750 aa15.47■□□□□ 0.07
TPM1-228ENST00000560975 A0A1W2PPK0 400 aa15.46■□□□□ 0.07
TPM1-228ENST00000560975 MFSD2BA6NFX1 497 aa15.46■□□□□ 0.07
TPM1-228ENST00000560975 GATBO75879 557 aaKnown RBP15.46■□□□□ 0.07
TPM1-228ENST00000560975 C1GALT1C1LP0DN25 315 aa15.46■□□□□ 0.07
TPM1-228ENST00000560975 MAPK8P45983 427 aa15.46■□□□□ 0.07
TPM1-228ENST00000560975 SLC3A1Q07837 685 aa15.46■□□□□ 0.07
TPM1-228ENST00000560975 HIST2H2AA3Q6FI13 130 aa15.46■□□□□ 0.07
TPM1-228ENST00000560975 ALKAL2Q6UX46 152 aa15.46■□□□□ 0.07
TPM1-228ENST00000560975 SYT9Q86SS6 491 aa15.46■□□□□ 0.07
TPM1-228ENST00000560975 FBXO22Q8NEZ5 403 aa15.46■□□□□ 0.07
TPM1-228ENST00000560975 LINC01599Q8WXQ3 324 aa15.46■□□□□ 0.07
TPM1-228ENST00000560975 RFKQ969G6 155 aa15.46■□□□□ 0.07
TPM1-228ENST00000560975 IFT46Q9NQC8 304 aa15.46■□□□□ 0.07
TPM1-228ENST00000560975 BAIAP2Q9UQB8 552 aa15.46■□□□□ 0.07
TPM1-228ENST00000560975 Q9Y3F1 56 aa15.46■□□□□ 0.07
TPM1-228ENST00000560975 HRH3Q9Y5N1 445 aa15.46■□□□□ 0.07
TPM1-228ENST00000560975 EPPINO95925 133 aa15.46■□□□□ 0.07
TPM1-228ENST00000560975 AKR1A1P14550 325 aa15.46■□□□□ 0.07
TPM1-228ENST00000560975 HMGA1P17096 107 aaKnown RBP15.46■□□□□ 0.07
TPM1-228ENST00000560975 GSTM3P21266 225 aa15.46■□□□□ 0.07
TPM1-228ENST00000560975 RPS7P62081 194 aaKnown RBP15.46■□□□□ 0.07
TPM1-228ENST00000560975 LMAN2Q12907 356 aa15.46■□□□□ 0.07
TPM1-228ENST00000560975 SNTB2Q13425 540 aaKnown RBP15.46■□□□□ 0.07
TPM1-228ENST00000560975 FZD5Q13467 585 aa15.46■□□□□ 0.07
TPM1-228ENST00000560975 COL9A2Q14055 689 aaPredicted RBP15.46■□□□□ 0.07
TPM1-228ENST00000560975 NHLRC3Q5JS37 347 aa15.46■□□□□ 0.07
TPM1-228ENST00000560975 SLC24A5Q71RS6 500 aa15.46■□□□□ 0.07
TPM1-228ENST00000560975 GSDMCQ9BYG8 508 aa15.46■□□□□ 0.07
TPM1-228ENST00000560975 TMEM168Q9H0V1 697 aa15.46■□□□□ 0.07
TPM1-228ENST00000560975 H2AFY2Q9P0M6 372 aaPredicted RBP15.46■□□□□ 0.07
TPM1-228ENST00000560975 KIF25Q9UIL4 384 aa15.46■□□□□ 0.07
TPM1-228ENST00000560975 CPSF4LA6NMK7 179 aaKnown RBP15.46■□□□□ 0.06
TPM1-228ENST00000560975 FOXE1O00358 373 aaPredicted RBP15.46■□□□□ 0.06
TPM1-228ENST00000560975 CXCL2P19875 107 aa15.46■□□□□ 0.06
TPM1-228ENST00000560975 OR1D2P34982 312 aa15.46■□□□□ 0.06
TPM1-228ENST00000560975 GPR4P46093 362 aa15.46■□□□□ 0.06
TPM1-228ENST00000560975 TAS2R41P59536 307 aa15.46■□□□□ 0.06
TPM1-228ENST00000560975 AADACL4Q5VUY2 407 aa15.46■□□□□ 0.06
TPM1-228ENST00000560975 RRM2BQ7LG56 351 aa15.46■□□□□ 0.06
TPM1-228ENST00000560975 OR4D9Q8NGE8 314 aa15.46■□□□□ 0.06
TPM1-228ENST00000560975 HMGB4Q8WW32 186 aa15.46■□□□□ 0.06
TPM1-228ENST00000560975 OR5P2Q8WZ92 322 aa15.46■□□□□ 0.06
TPM1-228ENST00000560975 SMPDL3AQ92484 453 aa15.46■□□□□ 0.06
TPM1-228ENST00000560975 MARCH5Q9NX47 278 aa15.46■□□□□ 0.06
TPM1-228ENST00000560975 SIGLEC5O15389 551 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 TFP02787 698 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 LPLP06858 475 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 PEPDP12955 493 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 SNRPBP14678 240 aaKnown RBP15.45■□□□□ 0.06
TPM1-228ENST00000560975 HLA-FP30511 346 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 SIGLEC14Q08ET2 396 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 LRFN4Q6PJG9 635 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 HSD11B1LQ7Z5J1 315 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 CEACAM19Q7Z692 300 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 RASGRP3Q8IV61 690 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 OR10Z1Q8NGY1 313 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 WDR89Q96FK6 387 aaPredicted RBP15.45■□□□□ 0.06
TPM1-228ENST00000560975 FOPNLQ96NB1 174 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 C19orf43Q9BQ61 176 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 ORAI3Q9BRQ5 295 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 OR10A4Q9H209 315 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 AUNIPQ9H7T9 357 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 MED20Q9H944 212 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 RNF215Q9Y6U7 377 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 L7N2F9 121 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 INPPL1O15357 1258 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 SLC11A1P49279 550 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 STXBP1P61764 594 aaKnown RBP15.45■□□□□ 0.06
TPM1-228ENST00000560975 SIM1P81133 766 aaPredicted RBP15.45■□□□□ 0.06
TPM1-228ENST00000560975 PIP5KL1Q5T9C9 394 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 BTN2A1Q7KYR7 527 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 FGD2Q7Z6J4 655 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 CPOQ8IVL8 374 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 OR52N1Q8NH53 320 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 THAP4Q8WY91 577 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 UPF1Q92900 1129 aaKnown RBP eCLIP15.45■□□□□ 0.06
TPM1-228ENST00000560975 GCDHQ92947 438 aaPredicted RBP15.45■□□□□ 0.06
TPM1-228ENST00000560975 VOPP1Q96AW1 172 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 RADILQ96JH8 1075 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 RIOK2Q9BVS4 552 aaKnown RBP15.45■□□□□ 0.06
TPM1-228ENST00000560975 C20orf85Q9H1P6 137 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 RPS6KB2Q9UBS0 482 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 SCN10AQ9Y5Y9 1956 aa15.45■□□□□ 0.06
TPM1-228ENST00000560975 E9PI62 339 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 PLATP00750 562 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 VEGFCP49767 419 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 SNRPD1P62314 119 aaKnown RBP15.44■□□□□ 0.06
TPM1-228ENST00000560975 IKBIPQ70UQ0 350 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 RASGEF1AQ8N9B8 481 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 GNPDA2Q8TDQ7 276 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 PRRC1Q96M27 445 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 EFCAB11Q9BUY7 163 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 SIRT3Q9NTG7 399 aaPredicted RBP15.44■□□□□ 0.06
TPM1-228ENST00000560975 P2RX2Q9UBL9 471 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 FBXL2Q9UKC9 423 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 LIPT1Q9Y234 373 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 SLC45A1Q9Y2W3 748 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms