RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 ADAM11O75078 769 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 CEACAM4O75871 244 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 DNAJC8O75937 253 aaPredicted RBP5.05□□□□□ -1.6
ZEB1-220ENST00000560909 ZFAND5O76080 213 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 SEC24DO94855 1032 aaPredicted RBP5.05□□□□□ -1.6
ZEB1-220ENST00000560909 NADKO95544 446 aaPredicted RBP5.05□□□□□ -1.6
ZEB1-220ENST00000560909 ANP32DO95626 131 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 AK1P00568 194 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 NGFRP08138 427 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 TNNI3P19429 210 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 MATN1P21941 496 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 PTGER1P34995 402 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 PIGAP37287 484 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 GSK3BP49841 420 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 ANXA11P50995 505 aaKnown RBP5.05□□□□□ -1.6
ZEB1-220ENST00000560909 CLCN2P51788 898 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 CRYBA2P53672 197 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 MTPNP58546 118 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 AP2B1P63010 937 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 RNF4P78317 190 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 LIPEQ05469 1076 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 FUT5Q11128 374 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 TRAP1Q12931 704 aaKnown RBP5.05□□□□□ -1.6
ZEB1-220ENST00000560909 LASP1Q14847 261 aaKnown RBP5.05□□□□□ -1.6
ZEB1-220ENST00000560909 EXOSC7Q15024 291 aaKnown RBP5.05□□□□□ -1.6
ZEB1-220ENST00000560909 DUSP5Q16690 384 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.05□□□□□ -1.6
ZEB1-220ENST00000560909 ZNF630Q2M218 657 aaPredicted RBP5.05□□□□□ -1.6
ZEB1-220ENST00000560909 VMACQ2NL98 169 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 ARHGAP11BQ3KRB8 267 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 DCAF10Q5QP82 559 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.05□□□□□ -1.65e-6■■□□□ 13.9
ZEB1-220ENST00000560909 MFSD4BQ5TF39 518 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 ERICH5Q6P6B1 374 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 NPSR1Q6W5P4 371 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 HSDL2Q6YN16 418 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 RNF111Q6ZNA4 994 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 APLFQ8IW19 511 aaPredicted RBP5.05□□□□□ -1.6
ZEB1-220ENST00000560909 SLC30A8Q8IWU4 369 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 ZZZ3Q8IYH5 903 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 CLEC4FQ8N1N0 589 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 FBXW8Q8N3Y1 598 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 SLC15A4Q8N697 577 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 HORMAD2Q8N7B1 307 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 SLC16A11Q8NCK7 471 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 OR5L2Q8NGL0 311 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 OR10A6Q8NH74 314 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 OR5AK3PQ8NH89 298 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 SLC38A5Q8WUX1 472 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 KCNE4Q8WWG9 221 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 NCLNQ969V3 563 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 HSPBAP1Q96EW2 488 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 LCORQ96JN0 433 aaPredicted RBP5.05□□□□□ -1.6
ZEB1-220ENST00000560909 SLC35G5Q96KT7 338 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 TRNT1Q96Q11 434 aaKnown RBP5.05□□□□□ -1.6
ZEB1-220ENST00000560909 OR7D2Q96RA2 312 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 CITED4Q96RK1 184 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 CCNL2Q96S94 520 aaPredicted RBP5.05□□□□□ -1.6
ZEB1-220ENST00000560909 SDF2Q99470 211 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 THUMPD3Q9BV44 507 aaKnown RBP5.05□□□□□ -1.6
ZEB1-220ENST00000560909 CNPPD1Q9BV87 410 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 BTBD2Q9BX70 525 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 RSPO3Q9BXY4 272 aaPredicted RBP5.05□□□□□ -1.6
ZEB1-220ENST00000560909 OR8D2Q9GZM6 311 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 WWTR1Q9GZV5 400 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 ZNF350Q9GZX5 532 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 MUC13Q9H3R2 512 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 CCDC86Q9H6F5 360 aaKnown RBP5.05□□□□□ -1.6
ZEB1-220ENST00000560909 GORASP2Q9H8Y8 452 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 IL1RL2Q9HB29 575 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 SH2D2AQ9NP31 389 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 MYOTQ9UBF9 498 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.05□□□□□ -1.6
ZEB1-220ENST00000560909 DTX4Q9Y2E6 619 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 PCDHGB3Q9Y5G1 929 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 SNX8Q9Y5X2 465 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 MRPS18BQ9Y676 258 aaKnown RBP5.05□□□□□ -1.6
ZEB1-220ENST00000560909 KCNE3Q9Y6H6 103 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 TLN1Q9Y490 2541 aaKnown RBP5.05□□□□□ -1.6
ZEB1-220ENST00000560909 SPTA1P02549 2419 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 EPG5Q9HCE0 2579 aa5.05□□□□□ -1.6
ZEB1-220ENST00000560909 CCDC88CQ9P219 2028 aa5.04□□□□□ -1.6
ZEB1-220ENST00000560909 MED13Q9UHV7 2174 aa5.04□□□□□ -1.6
ZEB1-220ENST00000560909 NSG1A0A0A6YYJ2 146 aa5.04□□□□□ -1.6
ZEB1-220ENST00000560909 C2orf92A0A1B0GVN3 265 aa5.04□□□□□ -1.6
ZEB1-220ENST00000560909 MED19A0JLT2 244 aaPredicted RBP5.04□□□□□ -1.6
ZEB1-220ENST00000560909 TMEM8BA6NDV4 472 aa5.04□□□□□ -1.6
ZEB1-220ENST00000560909 CFAP73A6NFT4 308 aa5.04□□□□□ -1.6
ZEB1-220ENST00000560909 A8MUA0 341 aa5.04□□□□□ -1.6
ZEB1-220ENST00000560909 A8MVJ9 347 aa5.04□□□□□ -1.6
ZEB1-220ENST00000560909 TAF4O00268 1085 aa5.04□□□□□ -1.6
ZEB1-220ENST00000560909 PEX12O00623 359 aa5.04□□□□□ -1.6
ZEB1-220ENST00000560909 EREGO14944 169 aa5.04□□□□□ -1.6
ZEB1-220ENST00000560909 NDUFB5O43674 189 aa5.04□□□□□ -1.6
ZEB1-220ENST00000560909 TSPAN2O60636 221 aa5.04□□□□□ -1.6
ZEB1-220ENST00000560909 ZNF354AO60765 605 aaPredicted RBP5.04□□□□□ -1.6
ZEB1-220ENST00000560909 KCNK2O95069 426 aa5.04□□□□□ -1.6
ZEB1-220ENST00000560909 IL33O95760 270 aa5.04□□□□□ -1.6
ZEB1-220ENST00000560909 IGKV1D-16P01601 117 aa5.04□□□□□ -1.6
ZEB1-220ENST00000560909 CELA3BP08861 270 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms