RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 AGAP5A6NIR3 686 aa10.08□□□□□ -0.8
SNRPA1-211ENST00000560433 SLC16A6O15403 523 aa10.08□□□□□ -0.8
SNRPA1-211ENST00000560433 DPM1O60762 260 aa10.08□□□□□ -0.8
SNRPA1-211ENST00000560433 CYP7B1O75881 506 aa10.08□□□□□ -0.8
SNRPA1-211ENST00000560433 NKX2-2O95096 273 aa10.08□□□□□ -0.8
SNRPA1-211ENST00000560433 CCNYL3P0C7X3 344 aa10.08□□□□□ -0.8
SNRPA1-211ENST00000560433 CCL4P13236 92 aa10.08□□□□□ -0.8
SNRPA1-211ENST00000560433 PLAURQ03405 335 aa10.08□□□□□ -0.8
SNRPA1-211ENST00000560433 APOFQ13790 326 aa10.08□□□□□ -0.8
SNRPA1-211ENST00000560433 NDUFAF6Q330K2 333 aa10.08□□□□□ -0.8
SNRPA1-211ENST00000560433 EXOSC6Q5RKV6 272 aaKnown RBP10.08□□□□□ -0.8
SNRPA1-211ENST00000560433 ZNF770Q6IQ21 691 aaPredicted RBP10.08□□□□□ -0.8
SNRPA1-211ENST00000560433 FAM199XQ6PEV8 388 aaPredicted RBP10.08□□□□□ -0.8
SNRPA1-211ENST00000560433 COX15Q7KZN9 410 aa10.08□□□□□ -0.8
SNRPA1-211ENST00000560433 KMT5CQ86Y97 462 aa10.08□□□□□ -0.8
SNRPA1-211ENST00000560433 RHBDD1Q8TEB9 315 aa10.08□□□□□ -0.8
SNRPA1-211ENST00000560433 GAL3ST4Q96RP7 486 aa10.08□□□□□ -0.8
SNRPA1-211ENST00000560433 FLRT3Q9NZU0 649 aa10.08□□□□□ -0.8
SNRPA1-211ENST00000560433 TMCC3Q9ULS5 477 aa10.08□□□□□ -0.8
SNRPA1-211ENST00000560433 OR10H1Q9Y4A9 318 aa10.08□□□□□ -0.8
SNRPA1-211ENST00000560433 CLCA3PQ9Y6N3 262 aa10.08□□□□□ -0.8
SNRPA1-211ENST00000560433 EP300Q09472 2414 aaPredicted RBP10.08□□□□□ -0.8
SNRPA1-211ENST00000560433 EFCAB7A8K855 629 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 GMFGO60234 142 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 BRINP1O60477 761 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 ADAM11O75078 769 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 COQ9O75208 318 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 AGR2O95994 175 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 CNR2P34972 360 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 ST13P50502 369 aaKnown RBP10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 RHAGQ02094 409 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 EPS8Q12929 822 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 CDK5R2Q13319 367 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 ZNHIT3Q15649 155 aaPredicted RBP10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 RFX4Q33E94 735 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 NIPAL1Q6NVV3 410 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 CARFQ8N187 725 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 ZNF615Q8N8J6 731 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 GATSQ8NAP1 163 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 NAT6Q93015 286 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 STACQ99469 402 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 MCHR1Q99705 422 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 ARHGDIGQ99819 225 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 MRPS26Q9BYN8 205 aaKnown RBP10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 ZNF556Q9HAH1 456 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 ACAD8Q9UKU7 415 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 RARRES3Q9UL19 164 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 NDRG4Q9ULP0 352 aaKnown RBP10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 ZNF232Q9UNY5 417 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 PCDHGA6Q9Y5G7 932 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 KHNYNO15037 678 aaKnown RBP10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 PRAMEF2O60811 474 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 UGT2B11O75310 529 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 ITGAMP11215 1152 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 ANXA8P13928 327 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 ZNF28P17035 718 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 CBLP22681 906 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 PRKAR1BP31321 381 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 RYKP34925 604 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 EEF1A1P68104 462 aaKnown RBP10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 FUT7Q11130 342 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 LARS2Q15031 903 aaKnown RBP10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 LIN52Q52LA3 116 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 C6orf141Q5SZD1 244 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 PRAMEF8Q5VWM4 474 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 PRAMEF7Q5VXH5 474 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 PGBD2Q6P3X8 592 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 ZER1Q7Z7L7 766 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 OR4K5Q8NGD3 323 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 OR4C3Q8NH37 302 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 FAM81AQ8TBF8 368 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 STT3BQ8TCJ2 826 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 MVB12AQ96EY5 273 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 PRRC1Q96M27 445 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 PAK1IP1Q9NWT1 392 aaPredicted RBP10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 CNIH4Q9P003 139 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 CDC14AQ9UNH5 594 aa10.07□□□□□ -0.8
SNRPA1-211ENST00000560433 A0A087WUU8 490 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 SH3PXD2BA1X283 911 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 CCDC160A6NGH7 325 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 C17orf51A8MQB3 221 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 H3BN98 237 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 KIAA0513O60268 411 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 MMP11P24347 488 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 HTR2AP28223 471 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 MAGEA8P43361 318 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 SLC37A1P57057 533 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 ACY1Q03154 408 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 PTGES3Q15185 160 aaKnown RBP10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 NEDD8Q15843 81 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 RHBDD2Q6NTF9 364 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 C16orf47Q6ZP98 133 aaPredicted RBP10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 PLEKHM3Q6ZWE6 761 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 PRICKLE2Q7Z3G6 844 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 PPP1R3BQ86XI6 285 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 SLITRK4Q8IW52 837 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 ENTHD1Q8IYW4 607 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 BCORP1Q8N888 145 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 SLC2A12Q8TD20 617 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 ADAMTS18Q8TE60 1221 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms