RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, human

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP8-209	ENST00000560297	MTHFD2L	Q9H903	347 aa	Predicted RBP	11.27	□□□□□ -0.61
USP8-209	ENST00000560297	A4GALT	Q9NPC4	353 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	UBQLN4	Q9NRR5	601 aa		11.27	□□□□□ -0.61
USP8-209	ENST00000560297	KLF13	Q9Y2Y9	288 aa	Predicted RBP	11.27	□□□□□ -0.61
USP8-209	ENST00000560297	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	11.27	□□□□□ -0.61
USP8-209	ENST00000560297	DSP	P15924	2871 aa	Known RBP	11.26	□□□□□ -0.61
USP8-209	ENST00000560297		B2RBV5	119 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	KLRC4-KLRK1	H3BQV0	150 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	ATXN7	O15265	892 aa	Predicted RBP	11.26	□□□□□ -0.61
USP8-209	ENST00000560297	SLC28A2	O43868	658 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	NME2P1	O60361	137 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	ATP5H	O75947	161 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	UBOX5	O94941	541 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	SNX4	O95219	450 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	UTS2	O95399	124 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	CYP4B1	P13584	511 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	HPGD	P15428	266 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	TBXA2R	P21731	343 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	NME2	P22392	152 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	CASP3	P42574	277 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	CD97	P48960	835 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	CRISP3	P54108	245 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	ATP12A	P54707	1039 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	PSME3	P61289	254 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	HPCA	P84074	193 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	CYP51A1	Q16850	503 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	ZNF630	Q2M218	657 aa	Predicted RBP	11.26	□□□□□ -0.61
USP8-209	ENST00000560297	FLYWCH1	Q4VC44	716 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	RABL3	Q5HYI8	236 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	CCNJ	Q5T5M9	372 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	SLC30A6	Q6NXT4	461 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	RPUSD3	Q6P087	351 aa	Known RBP	11.26	□□□□□ -0.61
USP8-209	ENST00000560297	C6orf89	Q6UWU4	347 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	NET1	Q7Z628	596 aa	Predicted RBP	11.26	□□□□□ -0.61
USP8-209	ENST00000560297	SLC30A8	Q8IWU4	369 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	SLC15A3	Q8IY34	581 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	PGAM4	Q8N0Y7	254 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	FBXW8	Q8N3Y1	598 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	ZNF527	Q8NB42	609 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	C11orf65	Q8NCR3	313 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	SLC38A5	Q8WUX1	472 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	PNPLA2	Q96AD5	504 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	SCMH1	Q96GD3	660 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	C1orf21	Q9H246	121 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	METTL7A	Q9H8H3	244 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	SPAG4	Q9NPE6	437 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	SDHAF3	Q9NRP4	125 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	FBXO34	Q9NWN3	711 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	CNOT11	Q9UKZ1	510 aa	Known RBP	11.26	□□□□□ -0.61
USP8-209	ENST00000560297	ABCG2	Q9UNQ0	655 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	WDR45	Q9Y484	360 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	PCDHGA10	Q9Y5H3	936 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	CNTRL	Q7Z7A1	2325 aa		11.26	□□□□□ -0.61
USP8-209	ENST00000560297	USP24	Q9UPU5	2620 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297		A0A0G2JPF8	293 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	PRAMEF27	A3QJZ7	478 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	HNRNPCL2	B2RXH8	293 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	HNRNPCL3	B7ZW38	293 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	C5orf58	C9J3I9	102 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	FCMR	O60667	390 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	HNRNPCL1	O60812	293 aa	Known RBP	11.25	□□□□□ -0.61
USP8-209	ENST00000560297	DNAJA2	O60884	412 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	ICOSLG	O75144	302 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	H6PD	O95479	791 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	NUDT7	P0C024	238 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	HNRNPCL4	P0DMR1	293 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	CCL3	P10147	92 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	ARAF	P10398	606 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	ENDOU	P21128	410 aa	Known RBP	11.25	□□□□□ -0.61
USP8-209	ENST00000560297	RASSF2	P50749	326 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	CDK6	Q00534	326 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	KLRB1	Q12918	225 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	BNIP1	Q12981	228 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	LY6D	Q14210	128 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	SELPLG	Q14242	412 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	GPR68	Q15743	365 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	ADRM1	Q16186	407 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	SYPL1	Q16563	259 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	PLEKHN1	Q494U1	663 aa	Predicted RBP	11.25	□□□□□ -0.61
USP8-209	ENST00000560297	SPATS1	Q496A3	300 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	REEP3	Q6NUK4	255 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	ERICH5	Q6P6B1	374 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	PCSK4	Q6UW60	755 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	PACS2	Q86VP3	889 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	CALHM3	Q86XJ0	350 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	ZNF619	Q8N2I2	560 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	ANKFN1	Q8N957	763 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	FAM98A	Q8NCA5	519 aa	Known RBP	11.25	□□□□□ -0.61
USP8-209	ENST00000560297	OR4C3	Q8NH37	302 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	NODAL	Q96S42	347 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	FAM173A	Q9BQD7	235 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	ANGPTL4	Q9BY76	406 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	MFRP	Q9BY79	579 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	TRIM8	Q9BZR9	551 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	BCL2L10	Q9HD36	194 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	KLHL1	Q9NR64	748 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	CSAG2	Q9Y5P2	127 aa		11.25	□□□□□ -0.61
USP8-209	ENST00000560297	EPG5	Q9HCE0	2579 aa		11.24	□□□□□ -0.61
USP8-209	ENST00000560297		A0A1W2PQD3	144 aa		11.24	□□□□□ -0.61
USP8-209	ENST00000560297	PRAMEF25	A6NGN4	478 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms