RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 YBX2Q9Y2T7 364 aaKnown RBP9.38□□□□□ -0.91
LRRC28-216ENST00000559819 ATG2AQ2TAZ0 1938 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 TMEM129A0AVI4 362 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 ZC3H12DA2A288 527 aaKnown RBP9.38□□□□□ -0.91
LRRC28-216ENST00000559819 DVL2O14641 736 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 SURF4O15260 269 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 CTSVO60911 334 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 CCNKO75909 580 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 IL1AP01583 271 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 GSTT2P0CG29 244 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 GSTT2BP0CG30 244 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 PRG2P13727 222 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 PRKAR1BP31321 381 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 IFNGR2P38484 337 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 SLC1A3P43003 542 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 KRR1Q13601 381 aaKnown RBP9.38□□□□□ -0.91
LRRC28-216ENST00000559819 GPR68Q15743 365 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 FAM214AQ32MH5 1076 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 ITPRIPL2Q3MIP1 535 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 PRRT3Q5FWE3 981 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 ARMC4Q5T2S8 1044 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 RSBN1Q5VWQ0 802 aaPredicted RBP9.38□□□□□ -0.91
LRRC28-216ENST00000559819 HSDL2Q6YN16 418 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 LRRC25Q8N386 305 aaPredicted RBP9.38□□□□□ -0.91
LRRC28-216ENST00000559819 SRFBP1Q8NEF9 429 aaKnown RBP9.38□□□□□ -0.91
LRRC28-216ENST00000559819 OR10G6Q8NH81 332 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 GAL3ST3Q96A11 431 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 DIRAS2Q96HU8 199 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 SAMD8Q96LT4 415 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 KCTD7Q96MP8 289 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 WDFY2Q96P53 400 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 TMEM106CQ9BVX2 250 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 TBC1D17Q9HA65 648 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 MRPS18AQ9NVS2 196 aaKnown RBP9.38□□□□□ -0.91
LRRC28-216ENST00000559819 FBXO34Q9NWN3 711 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 MALT1Q9UDY8 824 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 CLCA2Q9UQC9 943 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 MRPS2Q9Y399 296 aaKnown RBP9.38□□□□□ -0.91
LRRC28-216ENST00000559819 COLEC10Q9Y6Z7 277 aa9.38□□□□□ -0.91
LRRC28-216ENST00000559819 SHISA3A0PJX4 238 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 TFECO14948 347 aaPredicted RBP9.37□□□□□ -0.91
LRRC28-216ENST00000559819 GKN3PP0CG01 181 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 HOXD12P35452 270 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 TNFRSF17Q02223 184 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 TFF2Q03403 129 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 TPBGQ13641 420 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 SF3B4Q15427 424 aaKnown RBP eCLIP9.37□□□□□ -0.91
LRRC28-216ENST00000559819 MAPK14Q16539 360 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 PGGHGQ32M88 737 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 GLYR1Q49A26 553 aaPredicted RBP9.37□□□□□ -0.91
LRRC28-216ENST00000559819 TRMT12Q53H54 448 aaKnown RBP9.37□□□□□ -0.91
LRRC28-216ENST00000559819 AADACL4Q5VUY2 407 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 HEPHL1Q6MZM0 1159 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 TMEM53Q6P2H8 277 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 PRSS41Q7RTY9 318 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 ABI3BPQ7Z7G0 1075 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 UBQLNLQ8IYU4 475 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 NLGN4YQ8NFZ3 816 aaPredicted RBP9.37□□□□□ -0.91
LRRC28-216ENST00000559819 CAPSLQ8WWF8 208 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 ACOT11Q8WXI4 607 aaPredicted RBP9.37□□□□□ -0.91
LRRC28-216ENST00000559819 TMCO6Q96DC7 493 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 MSLNLQ96KJ4 702 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 HDHD5Q9BXW7 423 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 MED20Q9H944 212 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 KLHL28Q9NXS3 571 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 KLF15Q9UIH9 416 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 EXOSC1Q9Y3B2 195 aaKnown RBP9.37□□□□□ -0.91
LRRC28-216ENST00000559819 WDR45Q9Y484 360 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 LOC105369274A0A096LPK9 316 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 LOC102723532A0A0G2JNH3 316 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 SLC35F4A4IF30 521 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 EPOPA6NHQ4 379 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 STK25O00506 426 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 SLC30A4O14863 429 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 KLF4O43474 513 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 CSF3P09919 207 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 FPR3P25089 353 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 ACTR1BP42025 376 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 STAT5AP42229 794 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 SLC9A3P48764 834 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 ACTR1AP61163 376 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 COPZ1P61923 177 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 RGS1Q08116 209 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 ZNF155Q12901 538 aaPredicted RBP9.37□□□□□ -0.91
LRRC28-216ENST00000559819 GPR50Q13585 617 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 DECR1Q16698 335 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 CDC73Q6P1J9 531 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 ZNF620Q6ZNG0 422 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 SLC7A5P1Q8MH63 180 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 OR4N4Q8N0Y3 316 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 POGLUT1Q8NBL1 392 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 ZNF485Q8NCK3 441 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 PFN4Q8NHR9 129 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 FLVCR1-AS1Q8TAF5 88 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 SPRYD4Q8WW59 207 aaPredicted RBP9.37□□□□□ -0.91
LRRC28-216ENST00000559819 MS4A4EQ96PG1 132 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 ARHGAP9Q9BRR9 750 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 PBX4Q9BYU1 374 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 TMEM168Q9H0V1 697 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 SRMSQ9H3Y6 488 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms