RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 ST3GAL4Q11206 333 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 EXOSC7Q15024 291 aaKnown RBP10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 RAB11FIP2Q7L804 512 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 WDR53Q7Z5U6 358 aaPredicted RBP10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 NAGSQ8N159 534 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 MEIOBQ8N635 442 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 UBTD2Q8WUN7 234 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 KLHL31Q9H511 634 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 TMEM138Q9NPI0 162 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 TVP23BQ9NYZ1 205 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 NLGN3Q9NZ94 848 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 PFDN2Q9UHV9 154 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 IKZF2Q9UKS7 526 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 GPR45Q9Y5Y3 372 aa10.02□□□□□ -0.81
CARMIL3-202ENST00000559694 NSG1A0A0A6YYJ2 146 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 CDRT1O95170 752 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 LCKP06239 509 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 S100A9P06702 114 aaKnown RBP10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 TCN2P20062 427 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 CBLP22681 906 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 CRHBPP24387 322 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 MAGEA12P43365 314 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 REEP5Q00765 189 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 NDUFAF6Q330K2 333 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 SLC30A6Q6NXT4 461 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 LRRC69Q6ZNQ3 347 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 P4HA3Q7Z4N8 544 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 PELI3Q8N2H9 469 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 BBS10Q8TAM1 723 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 ASB15Q8WXK1 588 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 ASPNQ9BXN1 380 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 PPP4R1LQ9P1A2 415 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 ASB1Q9Y576 335 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 UBE2QL1A1L167 161 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 FAM227AF5H4B4 570 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 AIFM1O95831 613 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 GIMD1P0DJR0 217 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 KCNC4Q03721 635 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 GGTA1PQ4G0N0 100 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 ASB18Q6ZVZ8 466 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 DTWD1Q8N5C7 304 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 CLEC1AQ8NC01 280 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 OR52N2Q8NGI0 321 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 TMEM19Q96HH6 336 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 ACTRT3Q9BYD9 372 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 LRRN3Q9H3W5 708 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 IL1RAPQ9NPH3 570 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 TEX10Q9NXF1 929 aaPredicted RBP10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 EIF3KQ9UBQ5 218 aaKnown RBP10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 MED31Q9Y3C7 131 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 SCN5AQ14524 2016 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 CDC14CA4D256 554 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 A8MVJ9 347 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 SOX30O94993 753 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 P04436 131 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 IL7P13232 177 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 GPX3P22352 226 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 SLC9A3P48764 834 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 PER3P56645 1201 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 CDK5R2Q13319 367 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 C18orf63Q68DL7 685 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 CXXC5Q7LFL8 322 aaKnown RBP10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 CDRT4Q8N9R6 151 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 SLC37A3Q8NCC5 494 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 OR13F1Q8NGS4 319 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 PROKR1Q8TCW9 393 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 EPYCQ99645 322 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 HPF1Q9NWY4 346 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 VAPAQ9P0L0 249 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 ZSWIM8A7E2V4 1837 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 RALGAPA2Q2PPJ7 1873 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 BLOC1S5-TXNDC5H3BN57 136 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 CDC40O60508 579 aaKnown RBP eCLIP10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 PSMA3P25788 255 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 AVPR2P30518 371 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 IHHQ14623 411 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 COQ5Q5HYK3 327 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 ABHD17CQ6PCB6 329 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 ZNF550Q7Z398 422 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 FAM220AQ7Z4H9 259 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 LILRB4Q8NHJ6 448 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 KCTD7Q96MP8 289 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 PCDHGB6Q9Y5F9 930 aa10.01□□□□□ -0.81
CARMIL3-202ENST00000559694 ZNF726A6NNF4 738 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 TARM1B6A8C7 271 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 ALDOCP09972 364 aaKnown RBP10□□□□□ -0.81
CARMIL3-202ENST00000559694 TMEM234Q8WY98 164 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 MROQ9BYG7 248 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 MBD2Q9UBB5 411 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 KIAA0513O60268 411 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 GADD45AP24522 165 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 TRA2BP62995 288 aaKnown RBP10□□□□□ -0.81
CARMIL3-202ENST00000559694 EMX1Q04741 257 aaPredicted RBP10□□□□□ -0.81
CARMIL3-202ENST00000559694 EEF1A2Q05639 463 aaKnown RBP10□□□□□ -0.81
CARMIL3-202ENST00000559694 UBQLNLQ8IYU4 475 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 OR5D16Q8NGK9 328 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 OR2A1Q8NGT9 310 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 CREB3L4Q8TEY5 395 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 FAM86C1Q9NVL1 165 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 POFUT2Q9Y2G5 429 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms