RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 ZNF763Q0D2J5 394 aa11.79□□□□□ -0.52
TPM1-220ENST00000559556 ACKR1Q16570 336 aa11.79□□□□□ -0.52
TPM1-220ENST00000559556 CYP27C1Q4G0S4 372 aa11.79□□□□□ -0.52
TPM1-220ENST00000559556 LCA5Q86VQ0 697 aa11.79□□□□□ -0.52
TPM1-220ENST00000559556 PPP1R14CQ8TAE6 165 aa11.79□□□□□ -0.52
TPM1-220ENST00000559556 FNDC9Q8TBE3 224 aa11.79□□□□□ -0.52
TPM1-220ENST00000559556 METTL6Q8TCB7 284 aa11.79□□□□□ -0.52
TPM1-220ENST00000559556 Q96MF0 132 aa11.79□□□□□ -0.52
TPM1-220ENST00000559556 BBS4Q96RK4 519 aa11.79□□□□□ -0.52
TPM1-220ENST00000559556 FMO2Q99518 471 aa11.79□□□□□ -0.52
TPM1-220ENST00000559556 SLC39A3Q9BRY0 314 aa11.79□□□□□ -0.52
TPM1-220ENST00000559556 BDH2Q9BUT1 245 aa11.79□□□□□ -0.52
TPM1-220ENST00000559556 PINK1Q9BXM7 581 aa11.79□□□□□ -0.52
TPM1-220ENST00000559556 UBTD1Q9HAC8 227 aa11.79□□□□□ -0.52
TPM1-220ENST00000559556 FAM120CQ9NX05 1096 aaKnown RBP11.79□□□□□ -0.52
TPM1-220ENST00000559556 STK38LQ9Y2H1 464 aa11.79□□□□□ -0.52
TPM1-220ENST00000559556 ZNF337Q9Y3M9 751 aa11.79□□□□□ -0.52
TPM1-220ENST00000559556 SERTM1A2A2V5 107 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 C16orf97H3BN30 126 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 DLX3O60479 287 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 ENO1P06733 434 aaKnown RBP11.78□□□□□ -0.52
TPM1-220ENST00000559556 ANXA4P09525 319 aaPredicted RBP11.78□□□□□ -0.52
TPM1-220ENST00000559556 DDCP20711 480 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 ECHS1P30084 290 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 PKNOX1P55347 436 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 CLDN20P56880 219 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 LCP2Q13094 533 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 DECR1Q16698 335 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 TEX35Q5T0J7 233 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 ZNF550Q7Z398 422 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 YTHDF3Q7Z739 585 aaKnown RBP11.78□□□□□ -0.52
TPM1-220ENST00000559556 C17orf53Q8N3J3 647 aaPredicted RBP11.78□□□□□ -0.52
TPM1-220ENST00000559556 METTL25Q8N6Q8 603 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 UHMK1Q8TAS1 419 aaKnown RBP11.78□□□□□ -0.52
TPM1-220ENST00000559556 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.78□□□□□ -0.52
TPM1-220ENST00000559556 NUDT8Q8WV74 236 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 IGFBPL1Q8WX77 278 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 L3HYPDHQ96EM0 354 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 C1GALT1C1Q96EU7 318 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 HS3ST6Q96QI5 342 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 PIGQQ9BRB3 760 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 EBPLQ9BY08 206 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 GSX2Q9BZM3 304 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 RTN4RQ9BZR6 473 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 PTGES2Q9H7Z7 377 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 SDHAF3Q9NRP4 125 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 TAS2R7Q9NYW3 318 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 FLRT3Q9NZU0 649 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 MED11Q9P086 117 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 TMEM216Q9P0N5 145 aa11.78□□□□□ -0.52
TPM1-220ENST00000559556 DMGDHQ9UI17 866 aaKnown RBP11.78□□□□□ -0.52
TPM1-220ENST00000559556 C19orf53Q9UNZ5 99 aaPredicted RBP11.78□□□□□ -0.52
TPM1-220ENST00000559556 A0A087WUV0 522 aaPredicted RBP11.77□□□□□ -0.53
TPM1-220ENST00000559556 IGLV3-32A0A0A0MS00 114 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 H3BML4 177 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 SEC14L5O43304 696 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 IL33O95760 270 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 JUNP05412 331 aaKnown RBP11.77□□□□□ -0.53
TPM1-220ENST00000559556 IFI6P09912 130 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 FCGR2AP12318 317 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 IMPDH1P20839 514 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 ATP5F1P24539 256 aaPredicted RBP11.77□□□□□ -0.53
TPM1-220ENST00000559556 KCNJ5P48544 419 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 RPS3AP61247 264 aaKnown RBP11.77□□□□□ -0.53
TPM1-220ENST00000559556 STX5Q13190 355 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 PON3Q15166 354 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 PRSS53Q2L4Q9 553 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 TMEM44Q2T9K0 475 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 GLYR1Q49A26 553 aaPredicted RBP11.77□□□□□ -0.53
TPM1-220ENST00000559556 SH2D4BQ5SQS7 431 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 FAM71E1Q6IPT2 247 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 TMEM107Q6UX40 140 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 TIFABQ6ZNK6 161 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 C22orf34Q6ZV56 151 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 FAM214BQ7L5A3 538 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 GGNQ86UU5 652 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 PRIMA1Q86XR5 153 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 SLC22A9Q8IVM8 553 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 OR2L13Q8N349 312 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 ZNF610Q8N9Z0 462 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 PERPQ96FX8 193 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 KCNA7Q96RP8 456 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 MYNNQ9NPC7 610 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 GRID1Q9ULK0 1009 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 AP4B1Q9Y6B7 739 aa11.77□□□□□ -0.53
TPM1-220ENST00000559556 EXOC1LA0A1B0GW35 172 aa11.76□□□□□ -0.53
TPM1-220ENST00000559556 CCDC151A5D8V7 595 aa11.76□□□□□ -0.53
TPM1-220ENST00000559556 UPK1AO00322 258 aa11.76□□□□□ -0.53
TPM1-220ENST00000559556 TBXA2RP21731 343 aa11.76□□□□□ -0.53
TPM1-220ENST00000559556 GCAP28676 217 aa11.76□□□□□ -0.53
TPM1-220ENST00000559556 NTSP30990 170 aa11.76□□□□□ -0.53
TPM1-220ENST00000559556 NCBP2P52298 156 aaKnown RBP eCLIP11.76□□□□□ -0.53
TPM1-220ENST00000559556 PRKAA2P54646 552 aa11.76□□□□□ -0.53
TPM1-220ENST00000559556 PSMD4P55036 377 aaKnown RBP11.76□□□□□ -0.53
TPM1-220ENST00000559556 C2orf80Q0P641 193 aa11.76□□□□□ -0.53
TPM1-220ENST00000559556 OR5M1Q8NGP8 315 aa11.76□□□□□ -0.53
TPM1-220ENST00000559556 DUSP19Q8WTR2 217 aa11.76□□□□□ -0.53
TPM1-220ENST00000559556 GFM2Q969S9 779 aaKnown RBP11.76□□□□□ -0.53
TPM1-220ENST00000559556 ZC3HAV1LQ96H79 300 aaKnown RBP11.76□□□□□ -0.53
TPM1-220ENST00000559556 AMDHD1Q96NU7 426 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms