RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 CAPRIN1Q14444 709 aaKnown RBP19.87■□□□□ 0.77
SNX1-206ENST00000559389 ZNF843Q8N446 348 aa19.87■□□□□ 0.77
SNX1-206ENST00000559389 GRHL3Q8TE85 626 aa19.87■□□□□ 0.77
SNX1-206ENST00000559389 ROPN1LQ96C74 230 aa19.87■□□□□ 0.77
SNX1-206ENST00000559389 CMTM5Q96DZ9 223 aa19.87■□□□□ 0.77
SNX1-206ENST00000559389 TAAR6Q96RI8 345 aa19.87■□□□□ 0.77
SNX1-206ENST00000559389 SDF2Q99470 211 aa19.87■□□□□ 0.77
SNX1-206ENST00000559389 OSBPL11Q9BXB4 747 aa19.87■□□□□ 0.77
SNX1-206ENST00000559389 ANGPTL4Q9BY76 406 aa19.87■□□□□ 0.77
SNX1-206ENST00000559389 CORO2BQ9UQ03 480 aa19.87■□□□□ 0.77
SNX1-206ENST00000559389 PRAMEF27A3QJZ7 478 aa19.86■□□□□ 0.77
SNX1-206ENST00000559389 PINLYPA6NC86 204 aa19.86■□□□□ 0.77
SNX1-206ENST00000559389 ADAM10O14672 748 aa19.86■□□□□ 0.77
SNX1-206ENST00000559389 ZIC2O95409 532 aaPredicted RBP19.86■□□□□ 0.77
SNX1-206ENST00000559389 NGFRP08138 427 aa19.86■□□□□ 0.77
SNX1-206ENST00000559389 GUSBP08236 651 aa19.86■□□□□ 0.77
SNX1-206ENST00000559389 GPX2P18283 190 aa19.86■□□□□ 0.77
SNX1-206ENST00000559389 EVI2BP34910 448 aa19.86■□□□□ 0.77
SNX1-206ENST00000559389 GRAMD1BQ3KR37 738 aa19.86■□□□□ 0.77
SNX1-206ENST00000559389 PRR30Q53SZ7 412 aaPredicted RBP19.86■□□□□ 0.77
SNX1-206ENST00000559389 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.86■□□□□ 0.77
SNX1-206ENST00000559389 C10orf111Q8N326 155 aa19.86■□□□□ 0.77
SNX1-206ENST00000559389 ZFP62Q8NB50 900 aaPredicted RBP19.86■□□□□ 0.77
SNX1-206ENST00000559389 LRRC58Q96CX6 371 aa19.86■□□□□ 0.77
SNX1-206ENST00000559389 SLC39A3Q9BRY0 314 aa19.86■□□□□ 0.77
SNX1-206ENST00000559389 DOHHQ9BU89 302 aa19.86■□□□□ 0.77
SNX1-206ENST00000559389 POLE3Q9NRF9 147 aa19.86■□□□□ 0.77
SNX1-206ENST00000559389 KLRF1Q9NZS2 232 aa19.86■□□□□ 0.77
SNX1-206ENST00000559389 P2RX2Q9UBL9 471 aa19.86■□□□□ 0.77
SNX1-206ENST00000559389 LIPT1Q9Y234 373 aa19.86■□□□□ 0.77
SNX1-206ENST00000559389 NBEAQ8NFP9 2946 aa19.86■□□□□ 0.77
SNX1-206ENST00000559389 TLN1Q9Y490 2541 aaKnown RBP19.85■□□□□ 0.77
SNX1-206ENST00000559389 PIEZO2Q9H5I5 2752 aa19.85■□□□□ 0.77
SNX1-206ENST00000559389 FADS1O60427 444 aa19.85■□□□□ 0.77
SNX1-206ENST00000559389 TNFRSF21O75509 655 aa19.85■□□□□ 0.77
SNX1-206ENST00000559389 STX11O75558 287 aa19.85■□□□□ 0.77
SNX1-206ENST00000559389 SNX4O95219 450 aa19.85■□□□□ 0.77
SNX1-206ENST00000559389 MTPNP58546 118 aa19.85■□□□□ 0.77
SNX1-206ENST00000559389 KCNJ2P63252 427 aa19.85■□□□□ 0.77
SNX1-206ENST00000559389 FOXO1Q12778 655 aa19.85■□□□□ 0.77
SNX1-206ENST00000559389 SELPLGQ14242 412 aa19.85■□□□□ 0.77
SNX1-206ENST00000559389 SLC30A6Q6NXT4 461 aa19.85■□□□□ 0.77
SNX1-206ENST00000559389 FITM2Q8N6M3 262 aa19.85■□□□□ 0.77
SNX1-206ENST00000559389 POGLUT1Q8NBL1 392 aa19.85■□□□□ 0.77
SNX1-206ENST00000559389 OR4C3Q8NH37 302 aa19.85■□□□□ 0.77
SNX1-206ENST00000559389 TRIM8Q9BZR9 551 aa19.85■□□□□ 0.77
SNX1-206ENST00000559389 GALNT9Q9HCQ5 603 aa19.85■□□□□ 0.77
SNX1-206ENST00000559389 GID8Q9NWU2 228 aa19.85■□□□□ 0.77
SNX1-206ENST00000559389 THUMPD1Q9NXG2 353 aaKnown RBP19.85■□□□□ 0.77
SNX1-206ENST00000559389 TUBA8Q9NY65 449 aaPredicted RBP19.85■□□□□ 0.77
SNX1-206ENST00000559389 NTNG1Q9Y2I2 539 aa19.85■□□□□ 0.77
SNX1-206ENST00000559389 ZFYVE26Q68DK2 2539 aa19.85■□□□□ 0.77
SNX1-206ENST00000559389 LRRC3CA6NJW4 275 aa19.84■□□□□ 0.77
SNX1-206ENST00000559389 EVPLLA8MZ36 301 aa19.84■□□□□ 0.77
SNX1-206ENST00000559389 NPIPB9F8W1W9 429 aa19.84■□□□□ 0.77
SNX1-206ENST00000559389 AIM2O14862 343 aa19.84■□□□□ 0.77
SNX1-206ENST00000559389 SUV39H1O43463 412 aa19.84■□□□□ 0.77
SNX1-206ENST00000559389 KIAA0513O60268 411 aa19.84■□□□□ 0.77
SNX1-206ENST00000559389 TRIM3O75382 744 aaPredicted RBP19.84■□□□□ 0.77
SNX1-206ENST00000559389 OXSR1O95747 527 aaPredicted RBP19.84■□□□□ 0.77
SNX1-206ENST00000559389 NUDT7P0C024 238 aa19.84■□□□□ 0.77
SNX1-206ENST00000559389 GAS1P54826 345 aa19.84■□□□□ 0.77
SNX1-206ENST00000559389 HPCAP84074 193 aa19.84■□□□□ 0.77
SNX1-206ENST00000559389 MAPK11Q15759 364 aa19.84■□□□□ 0.77
SNX1-206ENST00000559389 FLYWCH1Q4VC44 716 aa19.84■□□□□ 0.77
SNX1-206ENST00000559389 FAM180AQ6UWF9 173 aa19.84■□□□□ 0.77
SNX1-206ENST00000559389 FRRS1Q6ZNA5 592 aa19.84■□□□□ 0.77
SNX1-206ENST00000559389 OLIG3Q7RTU3 272 aa19.84■□□□□ 0.77
SNX1-206ENST00000559389 ANKFN1Q8N957 763 aa19.84■□□□□ 0.77
SNX1-206ENST00000559389 OR8J3Q8NGG0 315 aa19.84■□□□□ 0.77
SNX1-206ENST00000559389 TMEM41AQ96HV5 264 aa19.84■□□□□ 0.77
SNX1-206ENST00000559389 ZNF597Q96LX8 424 aa19.84■□□□□ 0.77
SNX1-206ENST00000559389 TRNT1Q96Q11 434 aaKnown RBP19.84■□□□□ 0.77
SNX1-206ENST00000559389 A4GALTQ9NPC4 353 aa19.84■□□□□ 0.77
SNX1-206ENST00000559389 BOKQ9UMX3 212 aaPredicted RBP19.84■□□□□ 0.77
SNX1-206ENST00000559389 WDR45Q9Y484 360 aa19.84■□□□□ 0.77
SNX1-206ENST00000559389 WIF1Q9Y5W5 379 aa19.84■□□□□ 0.77
SNX1-206ENST00000559389 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.84■□□□□ 0.77
SNX1-206ENST00000559389 CNTRLQ7Z7A1 2325 aa19.84■□□□□ 0.77
SNX1-206ENST00000559389 EML6Q6ZMW3 1958 aa19.83■□□□□ 0.77
SNX1-206ENST00000559389 NPIPA5A0A0B4J1W7 369 aa19.83■□□□□ 0.77
SNX1-206ENST00000559389 EIF4E1BA6NMX2 242 aaKnown RBP19.83■□□□□ 0.77
SNX1-206ENST00000559389 TTLL8A6PVC2 850 aa19.83■□□□□ 0.77
SNX1-206ENST00000559389 B8ZZF3 427 aa19.83■□□□□ 0.77
SNX1-206ENST00000559389 NPIPA7E9PJI5 369 aa19.83■□□□□ 0.77
SNX1-206ENST00000559389 SCO2O43819 266 aa19.83■□□□□ 0.77
SNX1-206ENST00000559389 BCHEP06276 602 aa19.83■□□□□ 0.77
SNX1-206ENST00000559389 CHRM4P08173 479 aa19.83■□□□□ 0.77
SNX1-206ENST00000559389 NPIPA8P0DM63 369 aa19.83■□□□□ 0.77
SNX1-206ENST00000559389 TBXA2RP21731 343 aa19.83■□□□□ 0.77
SNX1-206ENST00000559389 DCTP40126 519 aa19.83■□□□□ 0.77
SNX1-206ENST00000559389 INPP5JQ15735 1006 aaPredicted RBP19.83■□□□□ 0.77
SNX1-206ENST00000559389 SYPL1Q16563 259 aa19.83■□□□□ 0.77
SNX1-206ENST00000559389 GPAT3Q53EU6 434 aa19.83■□□□□ 0.77
SNX1-206ENST00000559389 GCNT6Q5T4J0 391 aa19.83■□□□□ 0.77
SNX1-206ENST00000559389 AP1ARQ63HQ0 302 aa19.83■□□□□ 0.77
SNX1-206ENST00000559389 TYW3Q6IPR3 259 aaKnown RBP19.83■□□□□ 0.77
SNX1-206ENST00000559389 NANOGP8Q6NSW7 305 aa19.83■□□□□ 0.77
SNX1-206ENST00000559389 HACD2Q6Y1H2 254 aa19.83■□□□□ 0.77
SNX1-206ENST00000559389 CISD2Q8N5K1 135 aaKnown RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms