RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 CAMK4Q16566 473 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 KRT71Q3SY84 523 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 LINC01620Q4KN68 170 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 HIGD2BQ4VC39 106 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 BLOC1S2Q6QNY1 142 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 SLC25A42Q86VD7 318 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 PARGQ86W56 976 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 TBC1D21Q8IYX1 336 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 IPMKQ8NFU5 416 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 SPRYD4Q8WW59 207 aaPredicted RBP3.52□□□□□ -1.85
CASC4-206ENST00000558847 TESK2Q96S53 571 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 OMDQ99983 421 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 ERP44Q9BS26 406 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 ADNPQ9H2P0 1102 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 PALMDQ9NP74 551 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 TIGARQ9NQ88 270 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 FAM120CQ9NX05 1096 aaKnown RBP3.52□□□□□ -1.85
CASC4-206ENST00000558847 ELOVL2Q9NXB9 296 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 MRPL39Q9NYK5 338 aaKnown RBP3.52□□□□□ -1.85
CASC4-206ENST00000558847 KLK13Q9UKR3 277 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 WDR45Q9Y484 360 aa3.52□□□□□ -1.85
CASC4-206ENST00000558847 SYNJ2BP-COX16A0A087WUM0 186 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 A0A1W2PPR1 153 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 CLRN2A0PK11 232 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 MBLAC1A4D2B0 266 aaPredicted RBP3.51□□□□□ -1.85
CASC4-206ENST00000558847 DUX1O43812 170 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 GALR3O60755 368 aaPredicted RBP3.51□□□□□ -1.85
CASC4-206ENST00000558847 BCAS1O75363 584 aaPredicted RBP3.51□□□□□ -1.85
CASC4-206ENST00000558847 KBTBD11O94819 623 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 RENP00797 406 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 OPN1LWP04000 364 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 SERPINB2P05120 415 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 WNT2P09544 360 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 PDHBP11177 359 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 RPA2P15927 270 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 ATP6V1C1P21283 382 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 RPL4P36578 427 aaKnown RBP3.51□□□□□ -1.85
CASC4-206ENST00000558847 GNPDA1P46926 289 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 PPP1R3AQ16821 1122 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 CYP51A1Q16850 503 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 USH1GQ495M9 461 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 C14orf177Q52M58 125 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 RABGAP1LQ5R372 815 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 SPATA46Q5T0L3 261 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 SEL1L2Q5TEA6 688 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 GPRIN3Q6ZVF9 776 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 DPY19L4Q7Z388 723 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 HSD11B1LQ7Z5J1 315 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 TMEM110Q86TL2 294 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 LCA5Q86VQ0 697 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 SYT14Q8NB59 555 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 OR4Q3Q8NH05 313 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 PNPT1Q8TCS8 783 aaKnown RBP3.51□□□□□ -1.85
CASC4-206ENST00000558847 DHTKD1Q96HY7 919 aaPredicted RBP3.51□□□□□ -1.85
CASC4-206ENST00000558847 C4orf36Q96KX1 117 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 UBXN6Q9BZV1 441 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 GPN2Q9H9Y4 310 aaPredicted RBP3.51□□□□□ -1.85
CASC4-206ENST00000558847 EHFQ9NZC4 300 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 AIPL1Q9NZN9 384 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 RNF14Q9UBS8 474 aa3.51□□□□□ -1.85
CASC4-206ENST00000558847 NOTCH3Q9UM47 2321 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 FER1L5A0AVI2 2057 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 C15orf38-AP3S2A0A0A6YYH1 394 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 E9PAM4 449 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 XPO1O14980 1071 aaKnown RBP3.5□□□□□ -1.85
CASC4-206ENST00000558847 LRRTM2O43300 516 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 UFL1O94874 794 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 HPP00738 406 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 JCHAINP01591 159 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 UGT2B4P06133 528 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 MELTFP08582 738 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 HBQ1P09105 142 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 PTGER3P43115 390 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 HNMTP50135 292 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 ARHGDIBP52566 201 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 SLC8A3P57103 927 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 CBX1P83916 185 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 PLOD1Q02809 727 aaPredicted RBP3.5□□□□□ -1.85
CASC4-206ENST00000558847 CYLC2Q14093 348 aaPredicted RBP3.5□□□□□ -1.85
CASC4-206ENST00000558847 NHLRC3Q5JS37 347 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 METTL11BQ5VVY1 283 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 OR8G2PQ6IF36 304 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 ZNF343Q6P1L6 599 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 CES3Q6UWW8 571 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 GCNT7Q6ZNI0 430 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 VASH2Q86V25 355 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 SLC22A18ASQ8N1D0 253 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 FGFRL1Q8N441 504 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 POM121L12Q8N7R1 296 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 OR2L2Q8NH16 312 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 TRMT10AQ8TBZ6 339 aaKnown RBP3.5□□□□□ -1.85
CASC4-206ENST00000558847 VN1R17PQ8TDU5 208 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 CASD1Q96PB1 797 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 RPP25Q9BUL9 199 aaKnown RBP3.5□□□□□ -1.85
CASC4-206ENST00000558847 TEX13BQ9BXU2 312 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 DUSP16Q9BY84 665 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 TMEM117Q9H0C3 514 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms