RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 PTPN4P29074 926 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 SPRP35270 261 aaPredicted RBP9.13□□□□□ -0.95
MARK3-213ENST00000558611 SLC12A2P55011 1212 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 VSX2P58304 361 aaPredicted RBP9.13□□□□□ -0.95
MARK3-213ENST00000558611 RPS18P62269 152 aaKnown RBP9.13□□□□□ -0.95
MARK3-213ENST00000558611 RPS15P62841 145 aaKnown RBP9.13□□□□□ -0.95
MARK3-213ENST00000558611 ABATP80404 500 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 ZNF169Q14929 603 aaPredicted RBP9.13□□□□□ -0.95
MARK3-213ENST00000558611 EFTUD2Q15029 972 aaKnown RBP eCLIP9.13□□□□□ -0.95
MARK3-213ENST00000558611 HSPB2Q16082 182 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 PPP1R3AQ16821 1122 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 LINC00303Q3SY05 128 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 TAF1BQ53T94 588 aaPredicted RBP9.13□□□□□ -0.95
MARK3-213ENST00000558611 CST9LP1Q5W188 147 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 FRMPD2BQ6IN97 320 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 ZNF425Q6IV72 752 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 LCN10Q6JVE6 187 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 AGTRAPQ6RW13 159 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 LCTLQ6UWM7 567 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 PAQR7Q86WK9 346 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 MCEMP1Q8IX19 187 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 FAM185AQ8N0U4 392 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 MMP21Q8N119 569 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 TTC29Q8NA56 475 aaPredicted RBP9.13□□□□□ -0.95
MARK3-213ENST00000558611 ANKRD7Q92527 254 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 FAM162AQ96A26 154 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 MOAP1Q96BY2 351 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 FBXL8Q96CD0 374 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 MED8Q96G25 268 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 ZC3HAV1LQ96H79 300 aaKnown RBP9.13□□□□□ -0.95
MARK3-213ENST00000558611 FMO2Q99518 471 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 NLNQ9BYT8 704 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 PCBD2Q9H0N5 130 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 TSPYL1Q9H0U9 437 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 CAB39LQ9H9S4 337 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 TXLNGQ9NUQ3 528 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 UTP6Q9NYH9 597 aaKnown RBP9.13□□□□□ -0.95
MARK3-213ENST00000558611 SH3BP4Q9P0V3 963 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 DHCR7Q9UBM7 475 aaKnown RBP9.13□□□□□ -0.95
MARK3-213ENST00000558611 IKZF3Q9UKT9 509 aa9.13□□□□□ -0.95
MARK3-213ENST00000558611 SPENQ96T58 3664 aaKnown RBP9.13□□□□□ -0.95
MARK3-213ENST00000558611 A0A0J9YVX5 310 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 C9J4A7 227 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 CDC7O00311 574 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 SRPX2O60687 465 aaPredicted RBP9.12□□□□□ -0.95
MARK3-213ENST00000558611 STMN1P16949 149 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 SRD5A1P18405 259 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 AGAP20933 346 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 PTAFRP25105 342 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 PHBP35232 272 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 RELAQ04206 551 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 FOXI1Q12951 378 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 NCF4Q15080 339 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 ZKSCAN8Q15776 578 aaPredicted RBP9.12□□□□□ -0.95
MARK3-213ENST00000558611 KRTAP19-4Q3LI73 84 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 ATP1A1-AS1Q5TC04 95 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 GRTP1Q5TC63 336 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 C1orf189Q5VU69 101 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 ADAMTSL2Q86TH1 951 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 SYVN1Q86TM6 617 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 EPHX4Q8IUS5 362 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 LURAP1LQ8IV03 231 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 PTPMT1Q8WUK0 201 aaPredicted RBP9.12□□□□□ -0.95
MARK3-213ENST00000558611 ANKRD49Q8WVL7 239 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 ATL1Q8WXF7 558 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 IFT81Q8WYA0 676 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 RNF183Q96D59 192 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 FER1L6-AS2Q96M78 137 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 CITED2Q99967 270 aaPredicted RBP9.12□□□□□ -0.95
MARK3-213ENST00000558611 C17orf62Q9BQA9 187 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 DERL2Q9GZP9 239 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 ATG10Q9H0Y0 220 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 CDC42EP4Q9H3Q1 356 aaKnown RBP9.12□□□□□ -0.95
MARK3-213ENST00000558611 STARD5Q9NSY2 213 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 NINJ2Q9NZG7 142 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 SNX7Q9UNH6 387 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 FARSAQ9Y285 508 aaKnown RBP9.12□□□□□ -0.95
MARK3-213ENST00000558611 CPAMD8Q8IZJ3 1885 aa9.12□□□□□ -0.95
MARK3-213ENST00000558611 TRBV5-7A0A0A0MS05 114 aa9.11□□□□□ -0.95
MARK3-213ENST00000558611 A0A1B0GX78 115 aa9.11□□□□□ -0.95
MARK3-213ENST00000558611 H0YGG7 62 aa9.11□□□□□ -0.95
MARK3-213ENST00000558611 HAT1O14929 419 aa9.11□□□□□ -0.95
MARK3-213ENST00000558611 GUCA1CO95843 209 aa9.11□□□□□ -0.95
MARK3-213ENST00000558611 CCDC166P0CW27 439 aa9.11□□□□□ -0.95
MARK3-213ENST00000558611 HRH2P25021 359 aa9.11□□□□□ -0.95
MARK3-213ENST00000558611 RAB10P61026 200 aa9.11□□□□□ -0.95
MARK3-213ENST00000558611 DCDP81605 110 aaKnown RBP9.11□□□□□ -0.95
MARK3-213ENST00000558611 CDKL1Q00532 357 aa9.11□□□□□ -0.95
MARK3-213ENST00000558611 KLF10Q13118 480 aa9.11□□□□□ -0.95
MARK3-213ENST00000558611 CAMK2DQ13557 499 aa9.11□□□□□ -0.95
MARK3-213ENST00000558611 NAE1Q13564 534 aa9.11□□□□□ -0.95
MARK3-213ENST00000558611 LY6DQ14210 128 aa9.11□□□□□ -0.95
MARK3-213ENST00000558611 SLMAPQ14BN4 828 aa9.11□□□□□ -0.95
MARK3-213ENST00000558611 TSNQ15631 228 aaKnown RBP9.11□□□□□ -0.95
MARK3-213ENST00000558611 ZXDCQ2QGD7 858 aaPredicted RBP9.11□□□□□ -0.95
MARK3-213ENST00000558611 IGSF11Q5DX21 431 aa9.11□□□□□ -0.95
MARK3-213ENST00000558611 WASHC2DQ5SRD0 308 aa9.11□□□□□ -0.95
MARK3-213ENST00000558611 CAPN13Q6MZZ7 669 aaPredicted RBP9.11□□□□□ -0.95
MARK3-213ENST00000558611 PET117Q6UWS5 81 aa9.11□□□□□ -0.95
MARK3-213ENST00000558611 RBPMS2Q6ZRY4 209 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms