RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 MRPS15P82914 257 aaKnown RBP12.04□□□□□ -0.48
LDLR-207ENST00000558013 ZFP69Q49AA0 526 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 MINDY4Q4G0A6 757 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 FCRLBQ6BAA4 426 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 GDF7Q7Z4P5 450 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 KLBQ86Z14 1044 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 CPOQ8IVL8 374 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 IL17RCQ8NAC3 791 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 C7orf57Q8NEG2 295 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 OR2L8Q8NGY9 312 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 OR14C36Q8NHC7 312 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 SPRYD4Q8WW59 207 aaPredicted RBP12.04□□□□□ -0.48
LDLR-207ENST00000558013 UFD1Q92890 307 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 MCHR1Q99705 422 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 SPATA5L1Q9BVQ7 753 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 FGF22Q9HCT0 170 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 FGF20Q9NP95 211 aaPredicted RBP12.04□□□□□ -0.48
LDLR-207ENST00000558013 PAQR5Q9NXK6 330 aaPredicted RBP12.04□□□□□ -0.48
LDLR-207ENST00000558013 SLC7A7Q9UM01 511 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 NOX1Q9Y5S8 564 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 TMEM129A0AVI4 362 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 H0Y8X5 98 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 SURF4O15260 269 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 EMC8O43402 210 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 ZNF888P0CJ79 500 aaPredicted RBP12.04□□□□□ -0.48
LDLR-207ENST00000558013 TBXA2RP21731 343 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 MPIP34949 423 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 CTBP2P56545 445 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 TRAM2Q15035 370 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 NDUFA9Q16795 377 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 CCDC92Q53HC0 331 aaPredicted RBP12.04□□□□□ -0.48
LDLR-207ENST00000558013 ZNF628Q5EBL2 1059 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 TJAP1Q5JTD0 557 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 FAM27D1Q5T7N8 215 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 AADACL4Q5VUY2 407 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 PLEKHM3Q6ZWE6 761 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 VN1R4Q7Z5H5 301 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 CLDN22Q8N7P3 220 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 OR51G2Q8NGK0 314 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 GNPDA2Q8TDQ7 276 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 RPP25Q9BUL9 199 aaKnown RBP12.04□□□□□ -0.48
LDLR-207ENST00000558013 ATP13A2Q9NQ11 1180 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 HINT3Q9NQE9 182 aaKnown RBP12.04□□□□□ -0.48
LDLR-207ENST00000558013 FAM47E-STBD1D6RA91 191 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 SDHBP21912 280 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 RAB25P57735 213 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 TRA2BP62995 288 aaKnown RBP12.04□□□□□ -0.48
LDLR-207ENST00000558013 PRR5P85299 388 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 UBE3AQ05086 875 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 GPR68Q15743 365 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 RPE65Q16518 533 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 MAPK14Q16539 360 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 DEFB134Q4QY38 66 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 TMEM35AQ53FP2 167 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 XKRXQ6PP77 449 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 WDR88Q6ZMY6 472 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 MARCH9Q86YJ5 346 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 SETD6Q8TBK2 473 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 RAB7BQ96AH8 199 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 SLC38A2Q96QD8 506 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 PPIL3Q9H2H8 161 aaKnown RBP12.04□□□□□ -0.48
LDLR-207ENST00000558013 CD93Q9NPY3 652 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 C20orf141Q9NUB4 165 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 TBC1D29Q9UFV1 150 aa12.04□□□□□ -0.48
LDLR-207ENST00000558013 A0A1W2PQU0 124 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 GSAPA4D1B5 854 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 POM121BA6NF01 834 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 CCDC182A6NF36 153 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 KDM4EB2RXH2 506 aaPredicted RBP12.03□□□□□ -0.48
LDLR-207ENST00000558013 CASC3O15234 703 aaKnown RBP12.03□□□□□ -0.48
LDLR-207ENST00000558013 GSTM3P21266 225 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 FCARP24071 287 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 TRMT12Q53H54 448 aaKnown RBP12.03□□□□□ -0.48
LDLR-207ENST00000558013 IL20RBQ6UXL0 311 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 TMEM64Q6YI46 380 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 FRRS1Q6ZNA5 592 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 RASSF6Q6ZTQ3 369 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 SP7Q8TDD2 431 aaPredicted RBP12.03□□□□□ -0.48
LDLR-207ENST00000558013 ADAMTS15Q8TE58 950 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 ZNF764Q96H86 408 aaPredicted RBP12.03□□□□□ -0.48
LDLR-207ENST00000558013 ARHGDIGQ99819 225 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 DPH1Q9BZG8 443 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 TRIM45Q9H8W5 580 aaPredicted RBP12.03□□□□□ -0.48
LDLR-207ENST00000558013 ZGLP1P0C6A0 271 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 GABRA5P31644 462 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 IGFALSP35858 605 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 ST3GAL3Q11203 375 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 ASAH1Q13510 395 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 TMEM31Q5JXX7 168 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 PLBD1Q6P4A8 553 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 Q8N402 240 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 RAB42Q8N4Z0 105 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 ARIH2OSQ8N7S6 290 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 FAM181AQ8N9Y4 354 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 OR56A1Q8NGH5 318 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 NEIL3Q8TAT5 605 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 PIGXQ8TBF5 258 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 SLC41A3Q96GZ6 507 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 KXD1Q9BQD3 176 aa12.03□□□□□ -0.48
LDLR-207ENST00000558013 SLC22A4Q9H015 551 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms