RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 PPIAP62937 165 aaKnown RBP23.38■■□□□ 1.33
SMAD6-202ENST00000557916 MAPRE2Q15555 327 aa23.38■■□□□ 1.33
SMAD6-202ENST00000557916 IGFBP7Q16270 282 aa23.38■■□□□ 1.33
SMAD6-202ENST00000557916 GRAMD1BQ3KR37 738 aa23.38■■□□□ 1.33
SMAD6-202ENST00000557916 COX20Q5RI15 118 aa23.38■■□□□ 1.33
SMAD6-202ENST00000557916 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.38■■□□□ 1.33
SMAD6-202ENST00000557916 ATAD3BQ5T9A4 648 aa23.38■■□□□ 1.33
SMAD6-202ENST00000557916 C16orf62Q7Z3J2 963 aa23.38■■□□□ 1.33
SMAD6-202ENST00000557916 RETREG3Q86VR2 466 aa23.38■■□□□ 1.33
SMAD6-202ENST00000557916 DPP10Q8N608 796 aa23.38■■□□□ 1.33
SMAD6-202ENST00000557916 CHDHQ8NE62 594 aaPredicted RBP23.38■■□□□ 1.33
SMAD6-202ENST00000557916 RNF138Q8WVD3 245 aa23.38■■□□□ 1.33
SMAD6-202ENST00000557916 ZNF597Q96LX8 424 aa23.38■■□□□ 1.33
SMAD6-202ENST00000557916 CCT8L2Q96SF2 557 aa23.38■■□□□ 1.33
SMAD6-202ENST00000557916 SLX1AQ9BQ83 275 aa23.38■■□□□ 1.33
SMAD6-202ENST00000557916 TSPAN10Q9H1Z9 355 aaPredicted RBP23.38■■□□□ 1.33
SMAD6-202ENST00000557916 SLC25A37Q9NYZ2 338 aa23.38■■□□□ 1.33
SMAD6-202ENST00000557916 C2orf72A6NCS6 295 aa23.37■■□□□ 1.33
SMAD6-202ENST00000557916 FAM166BA8MTA8 275 aa23.37■■□□□ 1.33
SMAD6-202ENST00000557916 ACOT7O00154 380 aa23.37■■□□□ 1.33
SMAD6-202ENST00000557916 CLIC1O00299 241 aa23.37■■□□□ 1.33
SMAD6-202ENST00000557916 TFECO14948 347 aaPredicted RBP23.37■■□□□ 1.33
SMAD6-202ENST00000557916 SHOX2O60902 331 aaPredicted RBP23.37■■□□□ 1.33
SMAD6-202ENST00000557916 AK1P00568 194 aa23.37■■□□□ 1.33
SMAD6-202ENST00000557916 CRATP43155 626 aa23.37■■□□□ 1.33
SMAD6-202ENST00000557916 MVDP53602 400 aa23.37■■□□□ 1.33
SMAD6-202ENST00000557916 ARHGAP11BQ3KRB8 267 aa23.37■■□□□ 1.33
SMAD6-202ENST00000557916 SLC22A16Q86VW1 577 aa23.37■■□□□ 1.33
SMAD6-202ENST00000557916 MSRB3Q8IXL7 192 aa23.37■■□□□ 1.33
SMAD6-202ENST00000557916 TMEM41AQ96HV5 264 aa23.37■■□□□ 1.33
SMAD6-202ENST00000557916 SDF2Q99470 211 aa23.37■■□□□ 1.33
SMAD6-202ENST00000557916 VAPAQ9P0L0 249 aa23.37■■□□□ 1.33
SMAD6-202ENST00000557916 ABCG2Q9UNQ0 655 aa23.37■■□□□ 1.33
SMAD6-202ENST00000557916 LOC100653049A0A140TA62 436 aa23.36■■□□□ 1.33
SMAD6-202ENST00000557916 LRRC3CA6NJW4 275 aa23.36■■□□□ 1.33
SMAD6-202ENST00000557916 NPIPA5E9PKD4 350 aa23.36■■□□□ 1.33
SMAD6-202ENST00000557916 KRT34O76011 436 aa23.36■■□□□ 1.33
SMAD6-202ENST00000557916 MAGEA8P43361 318 aa23.36■■□□□ 1.33
SMAD6-202ENST00000557916 CLK3P49761 638 aaKnown RBP23.36■■□□□ 1.33
SMAD6-202ENST00000557916 HYAL4Q2M3T9 481 aa23.36■■□□□ 1.33
SMAD6-202ENST00000557916 HEPHL1Q6MZM0 1159 aa23.36■■□□□ 1.33
SMAD6-202ENST00000557916 DLEU7Q6UYE1 221 aa23.36■■□□□ 1.33
SMAD6-202ENST00000557916 DHDDSQ86SQ9 333 aa23.36■■□□□ 1.33
SMAD6-202ENST00000557916 SNX32Q86XE0 403 aa23.36■■□□□ 1.33
SMAD6-202ENST00000557916 SIAH3Q8IW03 269 aa23.36■■□□□ 1.33
SMAD6-202ENST00000557916 OR52N2Q8NGI0 321 aa23.36■■□□□ 1.33
SMAD6-202ENST00000557916 OR4C3Q8NH37 302 aa23.36■■□□□ 1.33
SMAD6-202ENST00000557916 NPIPA1Q9UND3 350 aa23.36■■□□□ 1.33
SMAD6-202ENST00000557916 ARL2BPQ9Y2Y0 163 aa23.36■■□□□ 1.33
SMAD6-202ENST00000557916 WIF1Q9Y5W5 379 aa23.36■■□□□ 1.33
SMAD6-202ENST00000557916 TRBV5-3A0A0A0MS03 114 aa23.35■■□□□ 1.33
SMAD6-202ENST00000557916 FBP2O00757 339 aa23.35■■□□□ 1.33
SMAD6-202ENST00000557916 GNB5O14775 395 aa23.35■■□□□ 1.33
SMAD6-202ENST00000557916 SCO2O43819 266 aa23.35■■□□□ 1.33
SMAD6-202ENST00000557916 WISP2O76076 250 aa23.35■■□□□ 1.33
SMAD6-202ENST00000557916 UNC5CO95185 931 aa23.35■■□□□ 1.33
SMAD6-202ENST00000557916 TBXA2RP21731 343 aa23.35■■□□□ 1.33
SMAD6-202ENST00000557916 TDGF1P3P51864 188 aa23.35■■□□□ 1.33
SMAD6-202ENST00000557916 GAS1P54826 345 aa23.35■■□□□ 1.33
SMAD6-202ENST00000557916 FOXK1P85037 733 aa23.35■■□□□ 1.33
SMAD6-202ENST00000557916 FNDC7Q5VTL7 733 aa23.35■■□□□ 1.33
SMAD6-202ENST00000557916 TMEM251Q8N6I4 163 aa23.35■■□□□ 1.33
SMAD6-202ENST00000557916 CCDC106Q9BWC9 280 aa23.35■■□□□ 1.33
SMAD6-202ENST00000557916 TBL1XR1Q9BZK7 514 aa23.35■■□□□ 1.33
SMAD6-202ENST00000557916 RAD21L1Q9H4I0 556 aa23.35■■□□□ 1.33
SMAD6-202ENST00000557916 UBQLN4Q9NRR5 601 aa23.35■■□□□ 1.33
SMAD6-202ENST00000557916 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.35■■□□□ 1.33
SMAD6-202ENST00000557916 NINQ8N4C6 2090 aa23.35■■□□□ 1.33
SMAD6-202ENST00000557916 STX11O75558 287 aa23.34■■□□□ 1.33
SMAD6-202ENST00000557916 NGFRP08138 427 aa23.34■■□□□ 1.33
SMAD6-202ENST00000557916 RFPL3SP0C7P2 107 aa23.34■■□□□ 1.33
SMAD6-202ENST00000557916 ETFAP13804 333 aa23.34■■□□□ 1.33
SMAD6-202ENST00000557916 EDN3P14138 238 aa23.34■■□□□ 1.33
SMAD6-202ENST00000557916 NFYCQ13952 458 aa23.34■■□□□ 1.33
SMAD6-202ENST00000557916 CYLC2Q14093 348 aaPredicted RBP23.34■■□□□ 1.33
SMAD6-202ENST00000557916 MMEL1Q495T6 779 aa23.34■■□□□ 1.33
SMAD6-202ENST00000557916 FLYWCH1Q4VC44 716 aa23.34■■□□□ 1.33
SMAD6-202ENST00000557916 TIGD3Q6B0B8 471 aa23.34■■□□□ 1.33
SMAD6-202ENST00000557916 MARCH3Q86UD3 253 aa23.34■■□□□ 1.33
SMAD6-202ENST00000557916 OR1J4Q8NGS1 313 aa23.34■■□□□ 1.33
SMAD6-202ENST00000557916 ROPN1LQ96C74 230 aa23.34■■□□□ 1.33
SMAD6-202ENST00000557916 GNRHR2Q96P88 292 aa23.34■■□□□ 1.33
SMAD6-202ENST00000557916 HOXD1Q9GZZ0 328 aa23.34■■□□□ 1.33
SMAD6-202ENST00000557916 MYLK2Q9H1R3 596 aa23.34■■□□□ 1.33
SMAD6-202ENST00000557916 B4GALT7Q9UBV7 327 aa23.34■■□□□ 1.33
SMAD6-202ENST00000557916 PRAMEF27A3QJZ7 478 aa23.33■■□□□ 1.33
SMAD6-202ENST00000557916 BBIP1A8MTZ0 92 aa23.33■■□□□ 1.33
SMAD6-202ENST00000557916 SNPHO15079 494 aa23.33■■□□□ 1.33
SMAD6-202ENST00000557916 OXSR1O95747 527 aaPredicted RBP23.33■■□□□ 1.33
SMAD6-202ENST00000557916 FAM107AO95990 144 aa23.33■■□□□ 1.33
SMAD6-202ENST00000557916 HPGDP15428 266 aa23.33■■□□□ 1.33
SMAD6-202ENST00000557916 PPIBP23284 216 aaKnown RBP23.33■■□□□ 1.33
SMAD6-202ENST00000557916 ELAVL4P26378 380 aaKnown RBP23.33■■□□□ 1.33
SMAD6-202ENST00000557916 MAGEA5P43359 124 aa23.33■■□□□ 1.33
SMAD6-202ENST00000557916 FUT5Q11128 374 aa23.33■■□□□ 1.33
SMAD6-202ENST00000557916 STX5Q13190 355 aa23.33■■□□□ 1.33
SMAD6-202ENST00000557916 RGNQ15493 299 aa23.33■■□□□ 1.33
SMAD6-202ENST00000557916 COQ5Q5HYK3 327 aa23.33■■□□□ 1.33
SMAD6-202ENST00000557916 APOOLQ6UXV4 268 aa23.33■■□□□ 1.33
SMAD6-202ENST00000557916 BNC2Q6ZN30 1099 aaPredicted RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms