RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 PTGES2Q9H7Z7 377 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 C3orf14Q9HBI5 128 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 LRTM1Q9HBL6 345 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 C1orf109Q9NX04 203 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 FLRT3Q9NZU0 649 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 PACSIN3Q9UKS6 424 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 PTGDR2Q9Y5Y4 395 aa12.82□□□□□ -0.36
SNX6-210ENST00000557341 HEATR5AQ86XA9 2040 aa12.81□□□□□ -0.36
SNX6-210ENST00000557341 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.81□□□□□ -0.36
SNX6-210ENST00000557341 A0A1W2PNV4 684 aa12.81□□□□□ -0.36
SNX6-210ENST00000557341 SLC22A20A6NK97 555 aa12.81□□□□□ -0.36
SNX6-210ENST00000557341 AZIN1O14977 448 aa12.81□□□□□ -0.36
SNX6-210ENST00000557341 TNFSF13O75888 250 aa12.81□□□□□ -0.36
SNX6-210ENST00000557341 KCNH1O95259 989 aa12.81□□□□□ -0.36
SNX6-210ENST00000557341 CHEK2O96017 543 aa12.81□□□□□ -0.36
SNX6-210ENST00000557341 HK1P19367 917 aa12.81□□□□□ -0.36
SNX6-210ENST00000557341 CPOXP36551 454 aa12.81□□□□□ -0.36
SNX6-210ENST00000557341 PCLAFQ15004 111 aa12.81□□□□□ -0.36
SNX6-210ENST00000557341 VPS26BQ4G0F5 336 aa12.81□□□□□ -0.36
SNX6-210ENST00000557341 OR2A2Q6IF42 318 aa12.81□□□□□ -0.36
SNX6-210ENST00000557341 RNF165Q6ZSG1 346 aa12.81□□□□□ -0.36
SNX6-210ENST00000557341 ZNF551Q7Z340 670 aaPredicted RBP12.81□□□□□ -0.36
SNX6-210ENST00000557341 C10orf107Q8IVU9 208 aa12.81□□□□□ -0.36
SNX6-210ENST00000557341 MEIOBQ8N635 442 aa12.81□□□□□ -0.36
SNX6-210ENST00000557341 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.81□□□□□ -0.361e-6■■■■■ 50.8
SNX6-210ENST00000557341 GFM2Q969S9 779 aaKnown RBP12.81□□□□□ -0.36
SNX6-210ENST00000557341 ALPK1Q96QP1 1244 aa12.81□□□□□ -0.36
SNX6-210ENST00000557341 TBL1XR1Q9BZK7 514 aa12.81□□□□□ -0.36
SNX6-210ENST00000557341 IQCGQ9H095 443 aaKnown RBP12.81□□□□□ -0.36
SNX6-210ENST00000557341 EQTNQ9NQ60 294 aa12.81□□□□□ -0.36
SNX6-210ENST00000557341 FIS1Q9Y3D6 152 aa12.81□□□□□ -0.36
SNX6-210ENST00000557341 NUP214P35658 2090 aaPredicted RBP12.81□□□□□ -0.36
SNX6-210ENST00000557341 SH3D21A4FU49 640 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 H3BML4 177 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 LINC01387J3KSC0 135 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 SEC14L5O43304 696 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 TGM6O95932 706 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 RAF1P04049 648 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 CRHP06850 196 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 PRPS2P11908 318 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 SDC1P18827 310 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 GABRA3P34903 492 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 EEFSECP57772 596 aaKnown RBP12.8□□□□□ -0.36
SNX6-210ENST00000557341 PPP2R2AP63151 447 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 RPL38P63173 70 aaKnown RBP12.8□□□□□ -0.36
SNX6-210ENST00000557341 SLC18A2Q05940 514 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 ANKRD26P1Q6NSI1 321 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 SZRD1Q7Z422 152 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 CAMKMTQ7Z624 323 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 TGIF2LYQ8IUE0 185 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 HOMEZQ8IX15 550 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 OR2T11Q8NH01 316 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 CIDECQ96AQ7 238 aaPredicted RBP12.8□□□□□ -0.36
SNX6-210ENST00000557341 PPCDCQ96CD2 204 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 MBD6Q96DN6 1003 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 C1GALT1C1Q96EU7 318 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 ZBED6CLQ96FA7 236 aaPredicted RBP12.8□□□□□ -0.36
SNX6-210ENST00000557341 APOPT1Q96IL0 206 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 FCRL1Q96LA6 429 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 DACH2Q96NX9 599 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 TSSK3Q96PN8 268 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 PIGQQ9BRB3 760 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 RTN4RQ9BZR6 473 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 REEP4Q9H6H4 257 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 MKS1Q9NXB0 559 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 MED11Q9P086 117 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 TMED5Q9Y3A6 229 aa12.8□□□□□ -0.36
SNX6-210ENST00000557341 RAI1Q7Z5J4 1906 aaPredicted RBP12.8□□□□□ -0.36
SNX6-210ENST00000557341 OR2M5A3KFT3 312 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 A8MXE2 369 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 MSTNO14793 375 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 TBX19O60806 448 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 TRIM13O60858 407 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 SMNDC1O75940 238 aaKnown RBP eCLIP12.79□□□□□ -0.36
SNX6-210ENST00000557341 UTS2O95399 124 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 CD99P14209 185 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 PRR5P85299 388 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 C17orf67Q0P5P2 114 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 ZNF385BQ569K4 471 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 KANK2Q63ZY3 851 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 MARCH3Q86UD3 253 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 RIBC1Q8N443 379 aaPredicted RBP12.79□□□□□ -0.36
SNX6-210ENST00000557341 CNEP1R1Q8N9A8 125 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 CDRT4Q8N9R6 151 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 CEP70Q8NHQ1 597 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 GPR151Q8TDV0 419 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 DUSP19Q8WTR2 217 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 SMPDL3BQ92485 455 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 PIK3R3Q92569 461 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 MS4A4EQ96PG1 132 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 TMUB1Q9BVT8 246 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 GATA5Q9BWX5 397 aaPredicted RBP12.79□□□□□ -0.36
SNX6-210ENST00000557341 PINK1Q9BXM7 581 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 HHATLQ9HCP6 504 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 NDRG3Q9UGV2 375 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 DNAJC15Q9Y5T4 150 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 ACANP16112 2415 aa12.79□□□□□ -0.36
SNX6-210ENST00000557341 NIPBLQ6KC79 2804 aaeCLIP12.79□□□□□ -0.36
SNX6-210ENST00000557341 IGLV3-32A0A0A0MS00 114 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 GXYLT2A0PJZ3 443 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms