RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 AGKQ53H12 422 aa12.42□□□□□ -0.42
SHMT2-228ENST00000557302 C6orf10Q5SRN2 563 aa12.42□□□□□ -0.42
SHMT2-228ENST00000557302 CCNJQ5T5M9 372 aa12.42□□□□□ -0.42
SHMT2-228ENST00000557302 FNDC7Q5VTL7 733 aa12.42□□□□□ -0.42
SHMT2-228ENST00000557302 SAXO2Q658L1 398 aa12.42□□□□□ -0.42
SHMT2-228ENST00000557302 TIGD3Q6B0B8 471 aa12.42□□□□□ -0.42
SHMT2-228ENST00000557302 BLOC1S3Q6QNY0 202 aa12.42□□□□□ -0.42
SHMT2-228ENST00000557302 DNAJC14Q6Y2X3 702 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-228ENST00000557302 OR5D16Q8NGK9 328 aa12.42□□□□□ -0.42
SHMT2-228ENST00000557302 MIPOL1Q8TD10 442 aa12.42□□□□□ -0.42
SHMT2-228ENST00000557302 ZNF317Q96PQ6 595 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-228ENST00000557302 SERHL2Q9H4I8 314 aa12.42□□□□□ -0.42
SHMT2-228ENST00000557302 PLSCR2Q9NRY7 297 aa12.42□□□□□ -0.42
SHMT2-228ENST00000557302 QPCTLQ9NXS2 382 aa12.42□□□□□ -0.42
SHMT2-228ENST00000557302 FLRT3Q9NZU0 649 aa12.42□□□□□ -0.42
SHMT2-228ENST00000557302 CCDC167Q9P0B6 97 aa12.42□□□□□ -0.42
SHMT2-228ENST00000557302 C15orf41Q9Y2V0 281 aa12.42□□□□□ -0.42
SHMT2-228ENST00000557302 KCNE3Q9Y6H6 103 aa12.42□□□□□ -0.42
SHMT2-228ENST00000557302 RELNP78509 3460 aa12.42□□□□□ -0.42
SHMT2-228ENST00000557302 EML6Q6ZMW3 1958 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 ZGRF1Q86YA3 2104 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 SLC19A2O60779 497 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 PDE9AO76083 593 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 AGR2O95994 175 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 AK1P00568 194 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 IGHG3P01860 377 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 CELA3AP09093 270 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 ABOP16442 354 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 ATP6V1C1P21283 382 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 TRPC1P48995 793 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 KHKP50053 298 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 GAS1P54826 345 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 CASP9P55211 416 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 GRAMD1BQ3KR37 738 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 DCST2Q5T1A1 773 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 ARHGAP11AQ6P4F7 1023 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 FUNDC1Q8IVP5 155 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 OR1J4Q8NGS1 313 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 SPDL1Q96EA4 605 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 GNRHR2Q96P88 292 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 TBL1XR1Q9BZK7 514 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 OR51I1Q9H343 314 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 ZNF385DQ9H6B1 395 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 LDAHQ9H6V9 325 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 SDHAF3Q9NRP4 125 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 FBXO34Q9NWN3 711 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 KLHL14Q9P2G3 628 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 NINQ8N4C6 2090 aa12.41□□□□□ -0.42
SHMT2-228ENST00000557302 LRRK2Q5S007 2527 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 A0A1B0GTH9 108 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 HCN1O60741 890 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 TRAPPC6AO75865 159 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 KRT75O95678 551 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 NGFRP08138 427 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 STSP08842 583 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 ZCCHC18P0CG32 403 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 HPGDP15428 266 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 CAPN3P20807 821 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 TBXA2RP21731 343 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 PTPN6P29350 595 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 ANXA11P50995 505 aaKnown RBP12.4□□□□□ -0.42
SHMT2-228ENST00000557302 CASP6P55212 293 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 TXNL4AP83876 142 aaKnown RBP12.4□□□□□ -0.42
SHMT2-228ENST00000557302 STX5Q13190 355 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 TOMM20Q15388 145 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 ATAD3BQ5T9A4 648 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 TNFAIP8L2Q6P589 184 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-228ENST00000557302 SLC2A7Q6PXP3 512 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 TRILQ7L0X0 811 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 C16orf62Q7Z3J2 963 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 ZAR1Q86SH2 424 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 MARCH3Q86UD3 253 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 RNF130Q86XS8 419 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 PLCZ1Q86YW0 608 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 SPPL2CQ8IUH8 684 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 WDSUB1Q8N9V3 476 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 CHDHQ8NE62 594 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-228ENST00000557302 GTF2H4Q92759 462 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 DTNBP1Q96EV8 351 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 UBQLN3Q9H347 655 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 EXO5Q9H790 373 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 ACKR4Q9NPB9 350 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 UBQLN4Q9NRR5 601 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 MRGBPQ9NV56 204 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 EXD2Q9NVH0 621 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 PPP4R1LQ9P1A2 415 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 LIPGQ9Y5X9 500 aa12.4□□□□□ -0.42
SHMT2-228ENST00000557302 HIVEP3Q5T1R4 2406 aa12.39□□□□□ -0.43
SHMT2-228ENST00000557302 TRGV5A0A0B4J1U4 118 aa12.39□□□□□ -0.43
SHMT2-228ENST00000557302 TRGV8A0A0C4DH27 118 aa12.39□□□□□ -0.43
SHMT2-228ENST00000557302 A0A1B0GVC2 190 aa12.39□□□□□ -0.43
SHMT2-228ENST00000557302 ALG1L2C9J202 215 aa12.39□□□□□ -0.43
SHMT2-228ENST00000557302 SUSD5O60279 629 aa12.39□□□□□ -0.43
SHMT2-228ENST00000557302 CBR3O75828 277 aa12.39□□□□□ -0.43
SHMT2-228ENST00000557302 OXSR1O95747 527 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-228ENST00000557302 HPNP05981 417 aa12.39□□□□□ -0.43
SHMT2-228ENST00000557302 OR12D1P0DN82 309 aa12.39□□□□□ -0.43
SHMT2-228ENST00000557302 PTGS2P35354 604 aa12.39□□□□□ -0.43
SHMT2-228ENST00000557302 OR5M10Q6IEU7 315 aa12.39□□□□□ -0.43
SHMT2-228ENST00000557302 FGD2Q7Z6J4 655 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms