RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 TFF2Q03403 129 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 EEF1A2Q05639 463 aaKnown RBP4.17□□□□□ -1.74
SRP54-212ENST00000556992 IL18R1Q13478 541 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 GAB1Q13480 694 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 SCARB2Q14108 478 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 MPEG1Q2M385 716 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 SLC36A3Q495N2 470 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 LRRC23Q53EV4 343 aaPredicted RBP4.17□□□□□ -1.74
SRP54-212ENST00000556992 IFI44LQ53G44 452 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 TMEM31Q5JXX7 168 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 WDR45BQ5MNZ6 344 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 OTUD3Q5T2D3 398 aaPredicted RBP4.17□□□□□ -1.74
SRP54-212ENST00000556992 SAXO2Q658L1 398 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 OR52E8Q6IFG1 317 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 NIPAL1Q6NVV3 410 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 SLC48A1Q6P1K1 146 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 SHQ1Q6PI26 577 aaKnown RBP4.17□□□□□ -1.74
SRP54-212ENST00000556992 TTC33Q6PID6 262 aaPredicted RBP4.17□□□□□ -1.74
SRP54-212ENST00000556992 SPESP1Q6UW49 350 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 TMEM64Q6YI46 380 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 TMEM26Q6ZUK4 368 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 ABHD13Q7L211 337 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 ZNF551Q7Z340 670 aaPredicted RBP4.17□□□□□ -1.74
SRP54-212ENST00000556992 CARM1Q86X55 608 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 RNF130Q86XS8 419 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 KRT73Q86Y46 540 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 KIF18BQ86Y91 864 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 CHERPQ8IWX8 916 aaKnown RBP4.17□□□□□ -1.74
SRP54-212ENST00000556992 SLC22A18ASQ8N1D0 253 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 C10orf111Q8N326 155 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 FAM86B1Q8N7N1 296 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 ARL10Q8N8L6 244 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 ZNF555Q8NEP9 628 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 TSPAN14Q8NG11 270 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 OR8K5Q8NH50 307 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 OR10G6Q8NH81 332 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 FLVCR1-AS1Q8TAF5 88 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 PNPT1Q8TCS8 783 aaKnown RBP4.17□□□□□ -1.74
SRP54-212ENST00000556992 CYGBQ8WWM9 190 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 RASSF5Q8WWW0 418 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 RLN3Q8WXF3 142 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 RSC1A1Q92681 617 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 TANKQ92844 425 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 EXOSC8Q96B26 276 aaKnown RBP4.17□□□□□ -1.74
SRP54-212ENST00000556992 DGCR14Q96DF8 476 aaKnown RBP4.17□□□□□ -1.74
SRP54-212ENST00000556992 RMND5BQ96G75 393 aaPredicted RBP4.17□□□□□ -1.74
SRP54-212ENST00000556992 TPD52L3Q96J77 140 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 C7orf34Q96L11 122 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 TRAPPC9Q96Q05 1148 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 ZNF607Q96SK3 696 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 MRI1Q9BV20 369 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 ADI1Q9BV57 179 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 NPLQ9BXD5 320 aaPredicted RBP4.17□□□□□ -1.74
SRP54-212ENST00000556992 ZNF696Q9H7X3 374 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 CXorf36Q9H7Y0 433 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 CAAP1Q9H8G2 361 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 REEP1Q9H902 201 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 CPNE5Q9HCH3 593 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 LYRM4Q9HD34 91 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 CD93Q9NPY3 652 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 PNPLA3Q9NST1 481 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 TUBA8Q9NY65 449 aaPredicted RBP4.17□□□□□ -1.74
SRP54-212ENST00000556992 PILRAQ9UKJ1 303 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 UTS2RQ9UKP6 389 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 ANGPT4Q9Y264 503 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 PADI2Q9Y2J8 665 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 KLHL20Q9Y2M5 609 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 ATG4BQ9Y4P1 393 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 SLC22A7Q9Y694 548 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 V9GYQ6 96 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 SPACA6W5XKT8 324 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 FRYLO94915 3013 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 KIAA1671Q9BY89 1806 aa4.16□□□□□ -1.74
SRP54-212ENST00000556992 ATRXP46100 2492 aa4.16□□□□□ -1.74
SRP54-212ENST00000556992 PLXNA4Q9HCM2 1894 aa4.16□□□□□ -1.74
SRP54-212ENST00000556992 DMXL1Q9Y485 3027 aa4.16□□□□□ -1.74
SRP54-212ENST00000556992 A0A087WXM4 84 aa4.16□□□□□ -1.74
SRP54-212ENST00000556992 A0A0G2JPF8 293 aa4.16□□□□□ -1.74
SRP54-212ENST00000556992 A0A0J9YY10 115 aa4.16□□□□□ -1.74
SRP54-212ENST00000556992 SMIM31A0A1B0GVY4 71 aa4.16□□□□□ -1.74
SRP54-212ENST00000556992 A0A1W2PR77 199 aa4.16□□□□□ -1.74
SRP54-212ENST00000556992 OR5K3A6NET4 321 aa4.16□□□□□ -1.74
SRP54-212ENST00000556992 DUXAA6NLW8 204 aa4.16□□□□□ -1.74
SRP54-212ENST00000556992 HNRNPCL2B2RXH8 293 aa4.16□□□□□ -1.74
SRP54-212ENST00000556992 HNRNPCL3B7ZW38 293 aa4.16□□□□□ -1.74
SRP54-212ENST00000556992 LMO7DNF2Z398 122 aa4.16□□□□□ -1.74
SRP54-212ENST00000556992 H0YGG7 62 aa4.16□□□□□ -1.74
SRP54-212ENST00000556992 H3BNH8 94 aa4.16□□□□□ -1.74
SRP54-212ENST00000556992 DLGAP1O14490 977 aa4.16□□□□□ -1.74
SRP54-212ENST00000556992 PGRMC2O15173 223 aa4.16□□□□□ -1.74
SRP54-212ENST00000556992 ADAMDEC1O15204 470 aa4.16□□□□□ -1.74
SRP54-212ENST00000556992 SLC16A6O15403 523 aa4.16□□□□□ -1.74
SRP54-212ENST00000556992 EMC8O43402 210 aa4.16□□□□□ -1.74
SRP54-212ENST00000556992 CTSVO60911 334 aa4.16□□□□□ -1.74
SRP54-212ENST00000556992 GCM2O75603 506 aaPredicted RBP4.16□□□□□ -1.74
SRP54-212ENST00000556992 ERAL1O75616 437 aaKnown RBP4.16□□□□□ -1.74
SRP54-212ENST00000556992 UBXN7O94888 489 aa4.16□□□□□ -1.74
SRP54-212ENST00000556992 BMP10O95393 424 aa4.16□□□□□ -1.74
SRP54-212ENST00000556992 PGM3O95394 542 aa4.16□□□□□ -1.74
SRP54-212ENST00000556992 AGR2O95994 175 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms