RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 RPLP0P05388 317 aaKnown RBP9.42□□□□□ -0.9
TMEM260-211ENST00000556648 PSMD7P51665 324 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 LIMK1P53667 647 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 GAS1P54826 345 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 GFERP55789 205 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 EFNB1P98172 346 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 IFITM3Q01628 133 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 ST3GAL3Q11203 375 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 COX10Q12887 443 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 ITGADQ13349 1161 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 TDGQ13569 410 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 ATP1A4Q13733 1029 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 UBXN2BQ14CS0 331 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.42□□□□□ -0.9
TMEM260-211ENST00000556648 MRPL2Q5T653 305 aaKnown RBP9.42□□□□□ -0.9
TMEM260-211ENST00000556648 SHFQ7M4L6 423 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 NRMQ8IXM6 262 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 PEX5LQ8IYB4 626 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 SLC34A3Q8N130 599 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 ZNF619Q8N2I2 560 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 ARL14Q8N4G2 192 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 FAM26EQ8N5C1 309 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 ZNF655Q8N720 491 aaPredicted RBP9.42□□□□□ -0.9
TMEM260-211ENST00000556648 COX18Q8N8Q8 333 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 POGLUT1Q8NBL1 392 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 OR52I1Q8NGK6 324 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 PIGXQ8TBF5 258 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 GPR151Q8TDV0 419 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 VMP1Q96GC9 406 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 MSANTD3Q96H12 275 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 TMEM80Q96HE8 168 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 LRR1Q96L50 414 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 Q96MT0 163 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 MGLLQ99685 303 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 MTHFD2LQ9H903 347 aaPredicted RBP9.42□□□□□ -0.9
TMEM260-211ENST00000556648 HHATLQ9HCP6 504 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 ETAA1Q9NY74 926 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 CARD8Q9Y2G2 431 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 SPACA6W5XKT8 324 aa9.42□□□□□ -0.9
TMEM260-211ENST00000556648 A0A087WV62 115 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 METTL15A6NJ78 407 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 CHURC1-FNTBB4DL54 471 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 WWP2O00308 870 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 CDC42EP2O14613 210 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 KLF4O43474 513 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 FOXS1O43638 330 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 KIAA0513O60268 411 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 PLOD3O60568 738 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 SDC3O75056 442 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 GPX5O75715 221 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 CH25HO95992 272 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 AGR2O95994 175 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 HBQ1P09105 142 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 GSTM3P21266 225 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 CSTF2P33240 577 aaKnown RBP eCLIP9.41□□□□□ -0.9
TMEM260-211ENST00000556648 GABRA3P34903 492 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 UGT2B10P36537 528 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 RFX3P48380 749 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 SERPINB10P48595 397 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 SMSP52788 366 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 DBPQ10586 325 aaPredicted RBP9.41□□□□□ -0.9
TMEM260-211ENST00000556648 TSPAN31Q12999 210 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 ZNF846Q147U1 533 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 SNAPC1Q16533 368 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 PRTGQ2VWP7 1150 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 FLYWCH1Q4VC44 716 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 LINC00471Q8N535 108 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 PFN4Q8NHR9 129 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 TEX47Q8TBZ9 253 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 ACOT11Q8WXI4 607 aaPredicted RBP9.41□□□□□ -0.9
TMEM260-211ENST00000556648 TRMT61AQ96FX7 289 aaKnown RBP9.41□□□□□ -0.9
TMEM260-211ENST00000556648 PEX11GQ96HA9 241 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 PRSS27Q9BQR3 290 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 TAPBPLQ9BX59 468 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 ANKHQ9HCJ1 492 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 PRDM9Q9NQV7 894 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 RHBDL2Q9NX52 303 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 KLHL28Q9NXS3 571 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 RPL36Q9Y3U8 105 aaKnown RBP9.41□□□□□ -0.9
TMEM260-211ENST00000556648 THADAQ6YHU6 1953 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 STX11O75558 287 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 OR5F1O95221 314 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 LYPD3O95274 346 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 IGKV1D-16P01601 117 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 CSF2P04141 144 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 SSTR4P31391 388 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 CD79BP40259 229 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 ETV5P41161 510 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 MAP3K8P41279 467 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 ETV1P50549 477 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 LARS2Q15031 903 aaKnown RBP9.41□□□□□ -0.9
TMEM260-211ENST00000556648 INAQ16352 499 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 DECR1Q16698 335 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 MANEAQ5SRI9 462 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 MEDAGQ5VYS4 303 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 SLC30A6Q6NXT4 461 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 C19orf48Q6RUI8 117 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 RASSF6Q6ZTQ3 369 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 MRGPREQ86SM8 312 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 CENPSQ8N2Z9 138 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms