RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 PEX11GQ96HA9 241 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 KCTD7Q96MP8 289 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 DDOQ99489 341 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 P2RY13Q9BPV8 354 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 GINS4Q9BRT9 223 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 TMEM175Q9BSA9 504 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 POLDIP3Q9BY77 421 aaKnown RBP8.06□□□□□ -1.12
MARK3-210ENST00000556463 RHBGQ9H310 441 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 PIGUQ9H490 435 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 ASB8Q9H765 288 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 C11orf16Q9NQ32 467 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 KLHL1Q9NR64 748 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 FAM86C1Q9NVL1 165 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 ARL15Q9NXU5 204 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 TRDV1A0A1B0GX56 115 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 TRBC1P01850 177 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 ZNF14P17017 642 aaPredicted RBP8.06□□□□□ -1.12
MARK3-210ENST00000556463 ZNF8P17098 575 aaPredicted RBP8.06□□□□□ -1.12
MARK3-210ENST00000556463 C4BPBP20851 252 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 ZP3P21754 424 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 GABRA5P31644 462 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 MMP12P39900 470 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 COL28A1Q2UY09 1125 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 GCNT6Q5T4J0 391 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 ATXN7L2Q5T6C5 722 aaPredicted RBP8.06□□□□□ -1.12
MARK3-210ENST00000556463 GRHL2Q6ISB3 625 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 KRT77Q7Z794 578 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 SERINC5Q86VE9 423 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 TIFAQ96CG3 184 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 ZDHHC12Q96GR4 267 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 GAL3ST1Q99999 423 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 WRAP53Q9BUR4 548 aaKnown RBP8.06□□□□□ -1.12
MARK3-210ENST00000556463 TSSK6Q9BXA6 273 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 NLNQ9BYT8 704 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 NKX6-2Q9C056 277 aaPredicted RBP8.06□□□□□ -1.12
MARK3-210ENST00000556463 TAS2R7Q9NYW3 318 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 CA5BQ9Y2D0 317 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 IRAK3Q9Y616 596 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 TRBV4-1A0A0J9YWV2 114 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 C1orf196B1AJZ1 125 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 SEPT4O43236 478 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 FARS2O95363 451 aaKnown RBP8.05□□□□□ -1.12
MARK3-210ENST00000556463 SPP1P10451 314 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 SPAM1P38567 509 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 NSG1P42857 185 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 C1DQ13901 141 aaKnown RBP8.05□□□□□ -1.12
MARK3-210ENST00000556463 ATXN7L3Q14CW9 347 aaPredicted RBP8.05□□□□□ -1.12
MARK3-210ENST00000556463 CHRNA6Q15825 494 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 C2orf27AQ580R0 203 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 CLLU1Q5K131 121 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 PDZD9Q8IXQ8 264 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 OR6S1Q8NH40 331 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 TREM1Q9NP99 234 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 EMC7Q9NPA0 242 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 ENTPD4Q9Y227 616 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 SLC22A14Q9Y267 594 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 SPIN1Q9Y657 262 aaPredicted RBP8.05□□□□□ -1.12
MARK3-210ENST00000556463 SHISA3A0PJX4 238 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 C2orf78A6NCI8 922 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 TRABD2BA6NFA1 517 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 SRPRAP08240 638 aaKnown RBP8.05□□□□□ -1.12
MARK3-210ENST00000556463 IGFBP1P08833 259 aaPredicted RBP8.05□□□□□ -1.12
MARK3-210ENST00000556463 TFPIP10646 304 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 GALP22466 123 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 ELAVL4P26378 380 aaKnown RBP8.05□□□□□ -1.12
MARK3-210ENST00000556463 CSNK1DP48730 415 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 CLCNKAP51800 687 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 AP1S2P56377 157 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 RPS25P62851 125 aaKnown RBP8.05□□□□□ -1.12
MARK3-210ENST00000556463 CDK5Q00535 292 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 FABP5Q01469 135 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 FZD5Q13467 585 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 PRSS53Q2L4Q9 553 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 SLC30A6Q6NXT4 461 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 TMIGD1Q6UXZ0 262 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 USP30Q70CQ3 517 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 UBE2R2Q712K3 238 aaPredicted RBP8.05□□□□□ -1.12
MARK3-210ENST00000556463 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.05□□□□□ -1.12
MARK3-210ENST00000556463 SLC30A8Q8IWU4 369 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 MEIOBQ8N635 442 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 NFKBIDQ8NI38 313 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 NSMAFQ92636 917 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 MRPL48Q96GC5 212 aaKnown RBP8.05□□□□□ -1.12
MARK3-210ENST00000556463 C10orf90Q96M02 699 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 RBP7Q96R05 134 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 SPATA5L1Q9BVQ7 753 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 SLC19A3Q9BZV2 496 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 OR51J1Q9H342 316 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 FOLH1BQ9HBA9 442 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 ZFYVE1Q9HBF4 777 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 DNAJC27Q9NZQ0 273 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 KCMF1Q9P0J7 381 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 MBD1Q9UIS9 605 aaPredicted RBP8.05□□□□□ -1.12
MARK3-210ENST00000556463 ASF1AQ9Y294 204 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 PPIL1Q9Y3C6 166 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 GLYATL1P3A0A0U1RQE8 302 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 KPNA3O00505 521 aaPredicted RBP8.05□□□□□ -1.12
MARK3-210ENST00000556463 LRRTM2O43300 516 aa8.05□□□□□ -1.12
MARK3-210ENST00000556463 AKAP8O43823 692 aaKnown RBP8.05□□□□□ -1.12
MARK3-210ENST00000556463 MPC2O95563 127 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms