RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 APOC3P02656 99 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 TRAPPC2P0DI81 140 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 TRAPPC2BP0DI82 140 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 PCMT1P22061 227 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 EFR3AQ14156 821 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 RAB12Q6IQ22 244 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 GALNTL5Q7Z4T8 443 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 JAGN1Q8N5M9 183 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 NANOGP1Q8N7R0 232 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 OR4K13Q8NH42 304 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 THAP6Q8TBB0 222 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 ELMOD3Q96FG2 381 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 KLHL9Q9P2J3 617 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 AK6Q9Y3D8 172 aaKnown RBP14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 GXYLT2A0PJZ3 443 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 UPK1AO00322 258 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 TFP02787 698 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 VAMP1P23763 118 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 EVI2BP34910 448 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 PGGHGQ32M88 737 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 KLHL26Q53HC5 615 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 CYHR1Q6ZMK1 362 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 BEST4Q8NFU0 473 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 OR51L1Q8NGJ5 315 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 SLC25A46Q96AG3 418 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 GALNT9Q9HCQ5 603 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 EVA1BQ9NVM1 165 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 NDRG2Q9UN36 371 aaKnown RBP14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 FARSAQ9Y285 508 aaKnown RBP14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 ANTXRLA6NF34 631 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 RAB28P51157 221 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 TP53I3Q53FA7 332 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 ACSM3Q53FZ2 586 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 B3GLCTQ6Y288 498 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 LILRA3Q8N6C8 439 aaPredicted RBP14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 SPERTQ8NA61 448 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 THAP4Q8WY91 577 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 HERVK_113Q902F9 699 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 KIAA1143Q96AT1 154 aaPredicted RBP14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 NIPAL2Q9H841 368 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 ZNF334Q9HCZ1 680 aaPredicted RBP14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 MARCH5Q9NX47 278 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 KLHL21Q9UJP4 597 aa14.16□□□□□ -0.14
ARHGEF40-207ENST00000556399 IGLON5A6NGN9 336 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 ALX3O95076 343 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 PPP1R3DO95685 299 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 DBIP07108 87 aaKnown RBP14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 PIPP12273 146 aaPredicted RBP14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 SLC6A12P48065 614 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 SIM1P81133 766 aaPredicted RBP14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 E2F1Q01094 437 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 LRRN1Q6UXK5 716 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 MACROD1Q9BQ69 325 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 ZNF471Q9BX82 626 aaPredicted RBP14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 TAS2R3Q9NYW6 316 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 ZNF432O94892 652 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 UCHL1P09936 223 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 CERS1P27544 350 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 VRK2Q86Y07 508 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 OR6N2Q8NGY6 317 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 HCAR2Q8TDS4 363 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 SPATA6Q9NWH7 488 aaPredicted RBP14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 TEX10Q9NXF1 929 aaPredicted RBP14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 FBXL12Q9NXK8 326 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 GRHPRQ9UBQ7 328 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 FABP7O15540 132 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 LATO43561 262 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 ADAMTS4O75173 837 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 GNRH1P01148 92 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 ADRB3P13945 408 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 ITGA3P26006 1051 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 TSPAN31Q12999 210 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 ASAH1Q13510 395 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 REM2Q8IYK8 340 aaPredicted RBP14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 HAVCR1Q96D42 359 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 DGAT2Q96PD7 388 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 MNTQ99583 582 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 SLC43A1O75387 559 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 PRSS23O95084 383 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 MT-ND4P03905 459 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 IL12BP29460 328 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 TEKQ02763 1124 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 DHCR24Q15392 516 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 AMZ1Q400G9 498 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 LRRC37A5PQ49AS3 106 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 C2orf27AQ580R0 203 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 SLC25A24Q6NUK1 477 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 NLRP8Q86W28 1048 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 SGIP1Q9BQI5 828 aa14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 CUEDC1Q9NWM3 386 aaPredicted RBP14.15□□□□□ -0.14
ARHGEF40-207ENST00000556399 TNFRSF10AO00220 468 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 IGFBP1P08833 259 aaPredicted RBP14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 CTBP2P56545 445 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 DTD2Q96FN9 168 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 PLEKHA6Q9Y2H5 1048 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 M0R082 166 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 SLCO2B1O94956 709 aa14.14□□□□□ -0.15
ARHGEF40-207ENST00000556399 CXCR1P25024 350 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms