RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 MSRB3Q8IXL7 192 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 FBXW8Q8N3Y1 598 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 RBMXL3Q8N7X1 1067 aaKnown RBP7.02□□□□□ -1.29
TDP1-214ENST00000556063 EXD3Q8N9H8 876 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 POGLUT1Q8NBL1 392 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 C11orf65Q8NCR3 313 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 MDS2Q8NDY4 140 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 CATSPER1Q8NEC5 780 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 TNIP2Q8NFZ5 429 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 OR10G3Q8NGC4 313 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 OR4N2Q8NGD1 307 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 FAM110BQ8TC76 370 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 SPPL2AQ8TCT8 520 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 PAQR8Q8TEZ7 354 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 PNPLA2Q96AD5 504 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 EFHD2Q96C19 240 aaPredicted RBP7.02□□□□□ -1.29
TDP1-214ENST00000556063 OTUB1Q96FW1 271 aaPredicted RBP7.02□□□□□ -1.29
TDP1-214ENST00000556063 SDF2Q99470 211 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 FAM173AQ9BQD7 235 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 TBL1XR1Q9BZK7 514 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 SERHL2Q9H4I8 314 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 TMEM38AQ9H6F2 299 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 A4GALTQ9NPC4 353 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 KLHL1Q9NR64 748 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 ARL8BQ9NVJ2 186 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 KLRF1Q9NZS2 232 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 BOKQ9UMX3 212 aaPredicted RBP7.02□□□□□ -1.29
TDP1-214ENST00000556063 ABCG2Q9UNQ0 655 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 WDR45Q9Y484 360 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 EML6Q6ZMW3 1958 aa7.02□□□□□ -1.29
TDP1-214ENST00000556063 A0A0G2JPF8 293 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 PRAMEF25A6NGN4 478 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 EIF4E1BA6NMX2 242 aaKnown RBP7.01□□□□□ -1.29
TDP1-214ENST00000556063 B2RBV5 119 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 HNRNPCL2B2RXH8 293 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 HNRNPCL3B7ZW38 293 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 K7EM74 188 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 ACOT7O00154 380 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 FXYD1O00168 92 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 EBAG9O00559 213 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 ZNF354AO60765 605 aaPredicted RBP7.01□□□□□ -1.29
TDP1-214ENST00000556063 ICOSLGO75144 302 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 TNFRSF21O75509 655 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 PDE9AO76083 593 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 RASAL1O95294 804 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 UTS2O95399 124 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 CBX6O95503 412 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 CRYABP02511 175 aaKnown RBP7.01□□□□□ -1.29
TDP1-214ENST00000556063 PDGFAP04085 211 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 BCHEP06276 602 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 HNRNPCL4P0DMR1 293 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 CCL3P10147 92 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 TBXA2RP21731 343 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 CASP3P42574 277 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 CPA2P48052 419 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 MVDP53602 400 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 ATP12AP54707 1039 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 MTPNP58546 118 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 PSME3P61289 254 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 KCNJ2P63252 427 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 CDK6Q00534 326 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 LY6DQ14210 128 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 GPR68Q15743 365 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 ZSWIM7Q19AV6 140 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 CCNJQ5T5M9 372 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 INTS11Q5TA45 600 aaKnown RBP7.01□□□□□ -1.29
TDP1-214ENST00000556063 SLC6A19Q695T7 634 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 REEP3Q6NUK4 255 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 RPUSD3Q6P087 351 aaKnown RBP7.01□□□□□ -1.29
TDP1-214ENST00000556063 GALNTL5Q7Z4T8 443 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 MDGA2Q7Z553 956 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 KRT73Q86Y46 540 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 MISPQ8IVT2 679 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 PEX5LQ8IYB4 626 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 PGAM4Q8N0Y7 254 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 ZNF619Q8N2I2 560 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 HIPK4Q8NE63 616 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 OR10A6Q8NH74 314 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 BBS10Q8TAM1 723 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 SLC38A5Q8WUX1 472 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 HGDQ93099 445 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 RNF166Q96A37 237 aaPredicted RBP7.01□□□□□ -1.29
TDP1-214ENST00000556063 SCMH1Q96GD3 660 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 SIGLEC12Q96PQ1 595 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 GPATCH1Q9BRR8 931 aaKnown RBP7.01□□□□□ -1.29
TDP1-214ENST00000556063 SLC39A3Q9BRY0 314 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 DOHHQ9BU89 302 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 SPATA5L1Q9BVQ7 753 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 OSBPL11Q9BXB4 747 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 ANGPTL4Q9BY76 406 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 MFRPQ9BY79 579 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 ZNF350Q9GZX5 532 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 ARMC7Q9H6L4 198 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 KAT8Q9H7Z6 458 aaKnown RBP7.01□□□□□ -1.29
TDP1-214ENST00000556063 MTHFD2LQ9H903 347 aaPredicted RBP7.01□□□□□ -1.29
TDP1-214ENST00000556063 SPAG4Q9NPE6 437 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 ADA2Q9NZK5 511 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 SUCOQ9UBS9 1254 aaKnown RBP7.01□□□□□ -1.29
TDP1-214ENST00000556063 B4GALT7Q9UBV7 327 aa7.01□□□□□ -1.29
TDP1-214ENST00000556063 ANAPC2Q9UJX6 822 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms