RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 IL23RQ5VWK5 629 aa16.71■□□□□ 0.27
NEDD1-208ENST00000555806 RELL2Q8NC24 303 aaPredicted RBP16.71■□□□□ 0.27
NEDD1-208ENST00000555806 ZPLD1Q8TCW7 415 aa16.71■□□□□ 0.27
NEDD1-208ENST00000555806 JADE3Q92613 823 aa16.71■□□□□ 0.27
NEDD1-208ENST00000555806 ZIM3Q96PE6 472 aa16.71■□□□□ 0.27
NEDD1-208ENST00000555806 TUBA1CQ9BQE3 449 aa16.71■□□□□ 0.27
NEDD1-208ENST00000555806 TBL1XR1Q9BZK7 514 aa16.71■□□□□ 0.27
NEDD1-208ENST00000555806 MCCC2Q9HCC0 563 aa16.71■□□□□ 0.27
NEDD1-208ENST00000555806 KCNK9Q9NPC2 374 aa16.71■□□□□ 0.27
NEDD1-208ENST00000555806 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 A0A1W2PRB8 838 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 B4DXG7 233 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 BIRC5O15392 142 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 ITM2AO43736 263 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 NKX2-2O95096 273 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 ACP2P11117 423 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 LAMP1P11279 417 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 CPN1P15169 458 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 HK1P19367 917 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 UQCRC1P31930 480 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 ZNF136P52737 540 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 PRR5P85299 388 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 PDCD2Q16342 344 aaPredicted RBP16.7■□□□□ 0.26
NEDD1-208ENST00000555806 GRAMD1BQ3KR37 738 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 CPTPQ5TA50 214 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 CES4AQ5XG92 561 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 GALNT10Q86SR1 603 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 MARCH3Q86UD3 253 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 FADS6Q8N9I5 356 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 OR2M3Q8NG83 312 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 GIMAP5Q96F15 307 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 LRRC46Q96FV0 321 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 CHMP6Q96FZ7 201 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 PPP1R36Q96LQ0 422 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 ZNF559Q9BR84 538 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 CALHM2Q9HA72 323 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 SLC24A3Q9HC58 644 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 ZCCHC3Q9NUD5 404 aaKnown RBP16.7■□□□□ 0.26
NEDD1-208ENST00000555806 ATAD3AQ9NVI7 634 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 MED11Q9P086 117 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 NTMQ9P121 344 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 EIF3LQ9Y262 564 aaKnown RBP16.7■□□□□ 0.26
NEDD1-208ENST00000555806 MRPS18CQ9Y3D5 142 aaKnown RBP16.7■□□□□ 0.26
NEDD1-208ENST00000555806 SNX8Q9Y5X2 465 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 MED12Q93074 2177 aa16.7■□□□□ 0.26
NEDD1-208ENST00000555806 KIAA1549Q9HCM3 1950 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 DCHS2Q6V1P9 2916 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 MBD3L4A6NDZ8 208 aaPredicted RBP16.69■□□□□ 0.26
NEDD1-208ENST00000555806 MBD3L3A6NE82 208 aaPredicted RBP16.69■□□□□ 0.26
NEDD1-208ENST00000555806 MBD3L5A6NJ08 208 aaPredicted RBP16.69■□□□□ 0.26
NEDD1-208ENST00000555806 ZIC3O60481 467 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 ZWINTO95229 277 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 IGKV1D-16P01601 117 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 ALOX5P09917 674 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 PRIM2P49643 509 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 LHX2P50458 406 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 ASCL1P50553 236 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 DGKQP52824 942 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 KRTAP10-9P60411 292 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 ABCE1P61221 599 aaKnown RBP16.69■□□□□ 0.26
NEDD1-208ENST00000555806 MAD2L1Q13257 205 aaPredicted RBP16.69■□□□□ 0.26
NEDD1-208ENST00000555806 MLC1Q15049 377 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 RAET1LQ5VY80 246 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 MFSD12Q6NUT3 480 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 CROCCP2Q86T23 111 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 KRTCAP2Q8N6L1 136 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 ZNF781Q8N8C0 355 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 COX18Q8N8Q8 333 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 C9orf106Q8NAJ2 232 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 SLC16A11Q8NCK7 471 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 MBD3L2Q8NHZ7 208 aaPredicted RBP16.69■□□□□ 0.26
NEDD1-208ENST00000555806 DUSP19Q8WTR2 217 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 HOXB13Q92826 284 aaPredicted RBP16.69■□□□□ 0.26
NEDD1-208ENST00000555806 FAM120BQ96EK7 910 aaKnown RBP16.69■□□□□ 0.26
NEDD1-208ENST00000555806 OTUB1Q96FW1 271 aaPredicted RBP16.69■□□□□ 0.26
NEDD1-208ENST00000555806 C16orf58Q96GQ5 468 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 PRPF18Q99633 342 aaKnown RBP16.69■□□□□ 0.26
NEDD1-208ENST00000555806 YIPF4Q9BSR8 244 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 RTN4RQ9BZR6 473 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 PTGES2Q9H7Z7 377 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 ZNF395Q9H8N7 513 aaPredicted RBP16.69■□□□□ 0.26
NEDD1-208ENST00000555806 ZNF629Q9UEG4 869 aaPredicted RBP16.69■□□□□ 0.26
NEDD1-208ENST00000555806 KCNN3Q9UGI6 736 aa16.69■□□□□ 0.26
NEDD1-208ENST00000555806 CSMD1Q96PZ7 3565 aa16.68■□□□□ 0.26
NEDD1-208ENST00000555806 CLCA1A8K7I4 914 aa16.68■□□□□ 0.26
NEDD1-208ENST00000555806 GMFGO60234 142 aa16.68■□□□□ 0.26
NEDD1-208ENST00000555806 ANGPTL1O95841 491 aa16.68■□□□□ 0.26
NEDD1-208ENST00000555806 PRPS1L1P21108 318 aa16.68■□□□□ 0.26
NEDD1-208ENST00000555806 BGNP21810 368 aa16.68■□□□□ 0.26
NEDD1-208ENST00000555806 CHMP24386 653 aa16.68■□□□□ 0.26
NEDD1-208ENST00000555806 CTSSP25774 331 aa16.68■□□□□ 0.26
NEDD1-208ENST00000555806 MAP3K8P41279 467 aa16.68■□□□□ 0.26
NEDD1-208ENST00000555806 AGFG1P52594 562 aaKnown RBP16.68■□□□□ 0.26
NEDD1-208ENST00000555806 DLX5P56178 289 aa16.68■□□□□ 0.26
NEDD1-208ENST00000555806 SNTB1Q13884 538 aaKnown RBP16.68■□□□□ 0.26
NEDD1-208ENST00000555806 GANABQ14697 944 aaKnown RBP16.68■□□□□ 0.26
NEDD1-208ENST00000555806 DUSP5Q16690 384 aa16.68■□□□□ 0.26
NEDD1-208ENST00000555806 SPDYE7PQ495Y7 208 aa16.68■□□□□ 0.26
NEDD1-208ENST00000555806 FIGNL1Q6PIW4 674 aa16.68■□□□□ 0.26
NEDD1-208ENST00000555806 ARSKQ6UWY0 536 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms