RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 SEM1Q6ZVN7 128 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 PLCZ1Q86YW0 608 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 CDRT4Q8N9R6 151 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 OR4C3Q8NH37 302 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 CEP70Q8NHQ1 597 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 FAM110BQ8TC76 370 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 SARAFQ96BY9 339 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 SDCCAG3Q96C92 435 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 KLHDC3Q9BQ90 382 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 TTYH2Q9BSA4 534 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 UGT2B28Q9BY64 529 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 BHLHE41Q9C0J9 482 aaPredicted RBP12.44□□□□□ -0.42
SNX6-203ENST00000555416 OR2B2Q9GZK3 357 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 C3orf14Q9HBI5 128 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 GPATCH2Q9NW75 528 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 ALKBH4Q9NXW9 302 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 ADGRG4Q8IZF6 3080 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 NAV2Q8IVL1 2488 aa12.44□□□□□ -0.42
SNX6-203ENST00000555416 ZIC3O60481 467 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 CBR3O75828 277 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 SMSP52788 366 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 UFM1P61960 85 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 RPS26P62854 115 aaKnown RBP12.43□□□□□ -0.42
SNX6-203ENST00000555416 PSPHP78330 225 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 STX5Q13190 355 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 TP53BP2Q13625 1128 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 SPANXN4Q5MJ08 99 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 C1orf185Q5T7R7 199 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 WLSQ5T9L3 541 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 ATG16L1Q676U5 607 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 SP5Q6BEB4 398 aaPredicted RBP12.43□□□□□ -0.42
SNX6-203ENST00000555416 ANKRD46Q86W74 232 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 ULK2Q8IYT8 1036 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 FADS6Q8N9I5 356 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 RAB3IL1Q8TBN0 382 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 CDS1Q92903 461 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 MS4A3Q96HJ5 214 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 MARK4Q96L34 752 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 PRPF18Q99633 342 aaKnown RBP12.43□□□□□ -0.42
SNX6-203ENST00000555416 UCK2Q9BZX2 261 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 DPY30Q9C005 99 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 DSN1Q9H410 356 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 SERHL2Q9H4I8 314 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 SLCO1B3Q9NPD5 702 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 ATAD3AQ9NVI7 634 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 AIG1Q9NVV5 245 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 RNF6Q9Y252 685 aa12.43□□□□□ -0.42
SNX6-203ENST00000555416 TTC36A6NLP5 189 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 FIGNL2A6NMB9 653 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 KLF11O14901 512 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 CFLARO15519 480 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 TOXO94900 526 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 CLDN14O95500 239 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 ALOX5P09917 674 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 AGAP20933 346 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 KIR3DL1P43629 444 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 STARP49675 285 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 RNF144AP50876 292 aaPredicted RBP12.42□□□□□ -0.42
SNX6-203ENST00000555416 DGKQP52824 942 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 CASP9P55211 416 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 B3GALT5-AS1P59052 145 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 PRR5P85299 388 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 ZNF630Q2M218 657 aaPredicted RBP12.42□□□□□ -0.42
SNX6-203ENST00000555416 LSM12Q3MHD2 195 aaKnown RBP12.42□□□□□ -0.42
SNX6-203ENST00000555416 VPS26BQ4G0F5 336 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 NHSL2Q5HYW2 709 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 PLXDC2Q6UX71 529 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 HDXQ7Z353 690 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 LIX1LQ8IVB5 337 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 GATSQ8NAP1 163 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 OR2M3Q8NG83 312 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 OR8J2Q8NGG1 315 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 DUSP19Q8WTR2 217 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 JADE3Q92613 823 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 RND1Q92730 232 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 TESCQ96BS2 214 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 WDYHV1Q96HA8 205 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 MAELQ96JY0 434 aaKnown RBP12.42□□□□□ -0.42
SNX6-203ENST00000555416 OR52B2Q96RD2 323 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 FAM120CQ9NX05 1096 aaKnown RBP12.42□□□□□ -0.42
SNX6-203ENST00000555416 TAS2R10Q9NYW0 307 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 MED11Q9P086 117 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 KLF2Q9Y5W3 355 aaPredicted RBP12.42□□□□□ -0.42
SNX6-203ENST00000555416 GPR45Q9Y5Y3 372 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 ITPR2Q14571 2701 aa12.42□□□□□ -0.42
SNX6-203ENST00000555416 NPIPA5A0A0B4J1W7 369 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 A0A0G2JNJ9 132 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 NKX2-6A6NCS4 301 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 NPIPA7E9PJI5 369 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 RNASET2O00584 256 aaKnown RBP12.41□□□□□ -0.42
SNX6-203ENST00000555416 GMFGO60234 142 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 WDR1O75083 606 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 KCNH1O95259 989 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 OXSR1O95747 527 aaPredicted RBP12.41□□□□□ -0.42
SNX6-203ENST00000555416 NPIPA8P0DM63 369 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 PRF1P14222 555 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 DDX5P17844 614 aaKnown RBP12.41□□□□□ -0.42
SNX6-203ENST00000555416 DPP4P27487 766 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 SRD5A2P31213 254 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 SOAT1P35610 550 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms