RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 OR14L1PQ8NHC6 308 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 PSMA8Q8TAA3 256 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 GIMAP5Q96F15 307 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 OTUB1Q96FW1 271 aaPredicted RBP11.05□□□□□ -0.64
SRP54-206ENST00000555317 C16orf58Q96GQ5 468 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 SLC35G5Q96KT7 338 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 PSMG3-AS1Q96PY0 264 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 STACQ99469 402 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 VKORC1Q9BQB6 163 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 BTBD2Q9BX70 525 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 DUSP22Q9NRW4 184 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 ALKBH4Q9NXW9 302 aa11.05□□□□□ -0.64
SRP54-206ENST00000555317 CACNA1CQ13936 2221 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 UQCRHLA0A096LP55 91 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 WIPF3A6NGB9 483 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 SLC22A3O75751 556 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 KCNK2O95069 426 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 TGDSO95455 350 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 RNF224P0DH78 156 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 ACP2P11117 423 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 GP1BBP13224 206 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 PTPN6P29350 595 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 CHI3L1P36222 383 aaPredicted RBP11.04□□□□□ -0.64
SRP54-206ENST00000555317 PTGDSP41222 190 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 UFM1P61960 85 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 LRRC74AQ0VAA2 488 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 DUSP5Q16690 384 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 GXYLT1Q4G148 440 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 PDCD4Q53EL6 469 aaKnown RBP11.04□□□□□ -0.64
SRP54-206ENST00000555317 FNDC7Q5VTL7 733 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 OR5M10Q6IEU7 315 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 CDC73Q6P1J9 531 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 FIGNL1Q6PIW4 674 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 MAMDC2Q7Z304 686 aaPredicted RBP11.04□□□□□ -0.64
SRP54-206ENST00000555317 MRGPRGQ86SM5 289 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 GALNT10Q86SR1 603 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 CLECL1Q8IZS7 167 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 ZNF808Q8N4W9 903 aaPredicted RBP11.04□□□□□ -0.64
SRP54-206ENST00000555317 FAM83FQ8NEG4 500 aaPredicted RBP11.04□□□□□ -0.64
SRP54-206ENST00000555317 CDS1Q92903 461 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 MAELQ96JY0 434 aaKnown RBP11.04□□□□□ -0.64
SRP54-206ENST00000555317 MARK4Q96L34 752 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 MAGEB18Q96M61 343 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 PHF12Q96QT6 1004 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 OR52E6Q96RD3 313 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 UBQLN3Q9H347 655 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 PTGES2Q9H7Z7 377 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 SLCO1B3Q9NPD5 702 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 TCF7L2Q9NQB0 619 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 PNPLA3Q9NST1 481 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 COQ3Q9NZJ6 369 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 TNFRSF10DQ9UBN6 386 aa11.04□□□□□ -0.64
SRP54-206ENST00000555317 PLEKHB1Q9UF11 243 aaPredicted RBP11.04□□□□□ -0.64
SRP54-206ENST00000555317 PHF3Q92576 2039 aaKnown RBP11.04□□□□□ -0.64
SRP54-206ENST00000555317 MED12Q93074 2177 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 DUXAA6NLW8 204 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 SCDO00767 359 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 ANKRD28O15084 1053 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 WDR1O75083 606 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 IL6P05231 212 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 PGRP06401 933 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 GABRA1P14867 456 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 UQCRC2P22695 453 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 ACVR2AP27037 513 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 LCN1P31025 176 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 AQP5P55064 265 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 SF3B4Q15427 424 aaKnown RBP eCLIP11.03□□□□□ -0.64
SRP54-206ENST00000555317 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.03□□□□□ -0.64
SRP54-206ENST00000555317 GRAMD1BQ3KR37 738 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 EIPR1Q53HC9 387 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 WIPI1Q5MNZ9 446 aaPredicted RBP11.03□□□□□ -0.64
SRP54-206ENST00000555317 ATAD3BQ5T9A4 648 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 XKRXQ6PP77 449 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 EPGNQ6UW88 154 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 MAVSQ7Z434 540 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 C6orf120Q7Z4R8 191 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 YRDCQ86U90 279 aaKnown RBP11.03□□□□□ -0.64
SRP54-206ENST00000555317 IFNEQ86WN2 208 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 PM20D2Q8IYS1 436 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 MIER2Q8N344 545 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 ARFGAP2Q8N6H7 521 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 WDSUB1Q8N9V3 476 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 ZNF527Q8NB42 609 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 PHF10Q8WUB8 498 aaKnown RBP11.03□□□□□ -0.64
SRP54-206ENST00000555317 CKAP2Q8WWK9 683 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 HOXB13Q92826 284 aaPredicted RBP11.03□□□□□ -0.64
SRP54-206ENST00000555317 OR52B2Q96RD2 323 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 PANX1Q96RD7 426 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 PIGUQ9H490 435 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 GIN1Q9NXP7 522 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 TAS2R10Q9NYW0 307 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 ZIM2Q9NZV7 527 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 SPRR3Q9UBC9 169 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 CAMK2AQ9UQM7 478 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 SLC6A5Q9Y345 797 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 GPR45Q9Y5Y3 372 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 UNC79Q9P2D8 2635 aa11.03□□□□□ -0.64
SRP54-206ENST00000555317 NCOA6Q14686 2063 aaPredicted RBP11.02□□□□□ -0.64
SRP54-206ENST00000555317 CRYBG3Q68DQ2 2970 aa11.02□□□□□ -0.64
SRP54-206ENST00000555317 C9JVG2 144 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms