RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 ANGPT2O15123 496 aa4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 JAK2O60674 1132 aa4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 ZNF253O75346 499 aa4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 RHBDL1O75783 438 aa4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 GJB5O95377 273 aa4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 CSF2P04141 144 aa4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 KRT8P05787 483 aa4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 CT45A10P0DMU9 189 aa4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 BCKDHAP12694 445 aa4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 PSMA2P25787 234 aa4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 OVGP1Q12889 678 aa4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 SLC10A1Q14973 349 aa4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 TAF7Q15545 349 aaPredicted RBP4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 EIPR1Q53HC9 387 aa4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 TCTEX1D4Q5JR98 221 aa4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 SCYL2Q6P3W7 929 aa4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 CCBE1Q6UXH8 406 aaPredicted RBP4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 FOXN4Q96NZ1 517 aa4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 TESK2Q96S53 571 aa4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 SLC30A2Q9BRI3 323 aa4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 SLC25A51Q9H1U9 297 aa4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 GPN2Q9H9Y4 310 aaPredicted RBP4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 FARSBQ9NSD9 589 aaKnown RBP4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 PRODH2Q9UF12 536 aa4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 LAMP5Q9UJQ1 280 aa4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 BLOC1S6Q9UL45 172 aa4.2□□□□□ -1.74
CKS1BP1-201ENST00000555221 GON4LQ3T8J9 2241 aa4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 DNMBPQ6XZF7 1577 aa4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 A0A087WWV3 80 aa4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 ZNF840PA6NDX5 716 aa4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 ZSCAN5CA6NGD5 496 aaPredicted RBP4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 SDHDO14521 159 aa4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 JCHAINP01591 159 aa4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 CHRNA1P02708 482 aa4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 TSPY4P0CV99 314 aa4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 TSPY10P0CW01 314 aa4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 ANXA3P12429 323 aa4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 KRT13P13646 458 aa4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 BCL3P20749 454 aa4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 GATA2P23769 480 aaPredicted RBP4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 OR1D4P47884 311 aa4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 CSRP3P50461 194 aa4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 PLOD1Q02809 727 aaPredicted RBP4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 SLC1A5Q15758 541 aa4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 CAMK4Q16566 473 aa4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 TPD52L1Q16890 204 aaPredicted RBP4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 C15orf32Q32M92 178 aa4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 SLC22A6Q4U2R8 563 aa4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 RNLSQ5VYX0 342 aa4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 SLC39A11Q8N1S5 342 aa4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 AKR1E2Q96JD6 320 aa4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 HCAR1Q9BXC0 346 aa4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 TMOD2Q9NZR1 351 aa4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 CYTH4Q9UIA0 394 aa4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 GMPPBQ9Y5P6 360 aa4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 URB2Q14146 1524 aaKnown RBP4.19□□□□□ -1.74
CKS1BP1-201ENST00000555221 G3V3Y1 287 aa4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 ZNF354AO60765 605 aaPredicted RBP4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 STX11O75558 287 aa4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 ASNSP08243 561 aa4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 HSPA5P11021 654 aaKnown RBP4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 EPB41P11171 864 aaKnown RBP4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 ACVR1BP36896 505 aa4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 FNTAP49354 379 aa4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 IST1P53990 364 aa4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 PUDPQ08623 228 aa4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 IL18R1Q13478 541 aa4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 LINC01620Q4KN68 170 aa4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 ASPHD2Q6ICH7 369 aa4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 SULT1C3Q6IMI6 304 aa4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 GCNT7Q6ZNI0 430 aa4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 HSD11B1LQ7Z5J1 315 aa4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 ANKRD37Q7Z713 158 aa4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 IFNEQ86WN2 208 aa4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 CDC20BQ86Y33 519 aa4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 MARCH9Q86YJ5 346 aa4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 THRSPQ92748 146 aa4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 DHTKD1Q96HY7 919 aaPredicted RBP4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 PYGO2Q9BRQ0 406 aa4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 OPN3Q9H1Y3 402 aaPredicted RBP4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 RBM28Q9NW13 759 aaKnown RBP4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 EHFQ9NZC4 300 aa4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 CRLS1Q9UJA2 301 aa4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 KIF27Q86VH2 1401 aa4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 SF3B1O75533 1304 aaKnown RBP eCLIP4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 GRIN2BQ13224 1484 aa4.18□□□□□ -1.74
CKS1BP1-201ENST00000555221 WDR97A6NE52 1622 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 KIF21AQ7Z4S6 1674 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 PPIAL4CA0A0B4J2A2 164 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 SAP18O00422 153 aaKnown RBP4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 SLC17A2O00624 439 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 BCL2L11O43521 198 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 DUX1O43812 170 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 TRIM3O75382 744 aaPredicted RBP4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 PCCBP05166 539 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 ALPIP09923 528 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 PPIAL4GP0DN37 164 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 LAMP1P11279 417 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 DLSTP36957 453 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 MAGEA9P43362 315 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms