RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 A6NL46 340 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 hCG_2039718K7EN88 272 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 FKBP6O75344 327 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 BCAS1O75363 584 aaPredicted RBP9.92□□□□□ -0.82
TDP1-211ENST00000555178 DIRAS1O95057 198 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 NADKO95544 446 aaPredicted RBP9.92□□□□□ -0.82
TDP1-211ENST00000555178 ANPEPP15144 967 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 CD247P20963 164 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 SLC7A1P30825 629 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 TRHRP34981 398 aaPredicted RBP9.92□□□□□ -0.82
TDP1-211ENST00000555178 MAGEA8P43361 318 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 KCNJ10P78508 379 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 HPCAP84074 193 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 RIPK1Q13546 671 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 DCAF10Q5QP82 559 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 HMBOX1Q6NT76 420 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 HSDL2Q6YN16 418 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 EIF3MQ7L2H7 374 aaKnown RBP9.92□□□□□ -0.82
TDP1-211ENST00000555178 LACC1Q8IV20 430 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 OR52E4Q8NGH9 312 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 BBS10Q8TAM1 723 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 BRIX1Q8TDN6 353 aaKnown RBP9.92□□□□□ -0.82
TDP1-211ENST00000555178 TMBIM1Q969X1 311 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 VMP1Q96GC9 406 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 PYURFQ96I23 114 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 PKP2Q99959 881 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 RTN4RQ9BZR6 473 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 SEMA6AQ9H2E6 1030 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 BCL2L10Q9HD36 194 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 Q9N2J8 555 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 OLAHQ9NV23 265 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 RLIMQ9NVW2 624 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 CBLCQ9ULV8 474 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 LIPT1Q9Y234 373 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 CHST2Q9Y4C5 530 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 ACACBO00763 2458 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 SUV39H1O43463 412 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 FRS3O43559 492 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 OR2J2O76002 312 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 HPP00738 406 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 IGHEP01854 428 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 SEMG1P04279 462 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 ALPPP05187 535 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 GPIP06744 558 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 CYC1P08574 325 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 CD63P08962 238 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 FUT4P22083 530 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 PIGAP37287 484 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 PPICP45877 212 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 VLDLRP98155 873 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 LRRC74BQ6ZQY2 392 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 FKBP9P1Q75LS8 142 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 SLC29A4Q7RTT9 530 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 TSEN54Q7Z6J9 526 aaKnown RBP9.92□□□□□ -0.82
TDP1-211ENST00000555178 AMIGO2Q86SJ2 522 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 PATL1Q86TB9 770 aaKnown RBP9.92□□□□□ -0.82
TDP1-211ENST00000555178 RBM45Q8IUH3 476 aaKnown RBP9.92□□□□□ -0.82
TDP1-211ENST00000555178 ARMC8Q8IUR7 673 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 OR4D11Q8NGI4 311 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 THOC3Q96J01 351 aaKnown RBP9.92□□□□□ -0.82
TDP1-211ENST00000555178 LCORQ96JN0 433 aaPredicted RBP9.92□□□□□ -0.82
TDP1-211ENST00000555178 CCNL2Q96S94 520 aaPredicted RBP9.92□□□□□ -0.82
TDP1-211ENST00000555178 CHID1Q9BWS9 393 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 DCLRE1BQ9H816 532 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 SEC14L3Q9UDX4 400 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 ABCG2Q9UNQ0 655 aa9.92□□□□□ -0.82
TDP1-211ENST00000555178 SAMD4AQ9UPU9 718 aaKnown RBP9.92□□□□□ -0.82
TDP1-211ENST00000555178 FRG2CA6NGY1 282 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 KIAA0513O60268 411 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 STX11O75558 287 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 AGR2O95994 175 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 AP2B1P63010 937 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 SELENOWP63302 87 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 PLAURQ03405 335 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 CDC20Q12834 499 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 PPP1R8Q12972 351 aaKnown RBP9.91□□□□□ -0.82
TDP1-211ENST00000555178 DEFB109BQ30KR1 87 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 FLYWCH1Q4VC44 716 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 MTX3Q5HYI7 312 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 AAGABQ6PD74 315 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 LYPD8Q6UX82 237 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 SLC30A8Q8IWU4 369 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 EID3Q8N140 333 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 DUS3LQ96G46 650 aaKnown RBP9.91□□□□□ -0.82
TDP1-211ENST00000555178 KLHDC3Q9BQ90 382 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 DOHHQ9BU89 302 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 CDCP1Q9H5V8 836 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 MMP25Q9NPA2 562 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 ADPRHL2Q9NX46 363 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 ANKRD10Q9NXR5 420 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 SH3GLB1Q9Y371 365 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 HRH3Q9Y5N1 445 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 MED12Q93074 2177 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 A0A0G2JPF8 293 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 HNRNPCL2B2RXH8 293 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 HNRNPCL3B7ZW38 293 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 M0R3H8 397 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 UGT2B17O75795 530 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 FESP07332 822 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 PABPC4LP0CB38 370 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms