RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 UBXN7O94888 489 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 CD3GP09693 182 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 CLUP10909 449 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 CHRNB1P11230 501 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 ITGB7P26010 798 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 SHC1P29353 583 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 TRHRP34981 398 aaPredicted RBP11.12□□□□□ -0.63
XRCC3-208ENST00000554811 SLC1A3P43003 542 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 SRSF5Q13243 272 aaKnown RBP11.12□□□□□ -0.63
XRCC3-208ENST00000554811 PDE7AQ13946 482 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 EXOSC7Q15024 291 aaKnown RBP11.12□□□□□ -0.63
XRCC3-208ENST00000554811 DEFB110Q30KQ9 67 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 MEDAGQ5VYS4 303 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 IKBIPQ70UQ0 350 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 NOXA1Q86UR1 476 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 KIF18BQ86Y91 864 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 CRIPAKQ8N1N5 446 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 VWA5B2Q8N398 1253 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 METTL27Q8N6F8 245 aaPredicted RBP11.12□□□□□ -0.63
XRCC3-208ENST00000554811 TP53I13Q8NBR0 393 aaPredicted RBP11.12□□□□□ -0.63
XRCC3-208ENST00000554811 OR4M2Q8NGB6 313 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 LILRB4Q8NHJ6 448 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 SETD7Q8WTS6 366 aaKnown RBP11.12□□□□□ -0.63
XRCC3-208ENST00000554811 SIGLEC11Q96RL6 698 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 ZNF559Q9BR84 538 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 ABCG5Q9H222 651 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 ING3Q9NXR8 418 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 V9GYH0 126 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 GABRPO00591 440 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 LYRM1O43325 122 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 SSNA1O43805 119 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 NFATC1O95644 943 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 HIST1H1TP22492 207 aaPredicted RBP11.12□□□□□ -0.63
XRCC3-208ENST00000554811 OR10A3P58181 314 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 DSG2Q14126 1118 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 FAM111BQ6SJ93 734 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 KIAA1324Q6UXG2 1013 aaKnown RBP11.12□□□□□ -0.63
XRCC3-208ENST00000554811 CXXC5Q7LFL8 322 aaKnown RBP11.12□□□□□ -0.63
XRCC3-208ENST00000554811 CAMKMTQ7Z624 323 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 PEX5LQ8IYB4 626 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 SHISA5Q8N114 240 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 COX18Q8N8Q8 333 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 SUN3Q8TAQ9 357 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 CREB3L4Q8TEY5 395 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 SNAPC3Q92966 411 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 SLC25A46Q96AG3 418 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 OMA1Q96E52 524 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 GPR174Q9BXC1 333 aa11.12□□□□□ -0.63
XRCC3-208ENST00000554811 A0A1W2PQU0 124 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 B4DXG7 233 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 H0Y8X5 98 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 HOXC11O43248 304 aaPredicted RBP11.11□□□□□ -0.63
XRCC3-208ENST00000554811 MOSPD3O75425 235 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 KLHL18O94889 574 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 SEMA3DO95025 777 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 ZNF888P0CJ79 500 aaPredicted RBP11.11□□□□□ -0.63
XRCC3-208ENST00000554811 ZNF33BQ06732 778 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 OTPQ5XKR4 325 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 CEACAM19Q7Z692 300 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 SERPINA12Q8IW75 414 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 CDK20Q8IZL9 346 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 GCDHQ92947 438 aaPredicted RBP11.11□□□□□ -0.63
XRCC3-208ENST00000554811 VOPP1Q96AW1 172 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 PRRC1Q96M27 445 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 MIXL1Q9H2W2 232 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 DPEP2Q9H4A9 486 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 NDUFB11Q9NX14 153 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 OR2W5A6NFC9 320 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 RPP14O95059 124 aaKnown RBP11.11□□□□□ -0.63
XRCC3-208ENST00000554811 HLA-DPB1P04440 258 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 ACADLP28330 430 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 RAB28P51157 221 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 IRF4Q15306 451 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 NDUFA5Q16718 116 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 PRPF38BQ5VTL8 546 aaKnown RBP11.11□□□□□ -0.63
XRCC3-208ENST00000554811 MZT2AQ6P582 158 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 PFN4Q8NHR9 129 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 GOT1L1Q8NHS2 421 aaPredicted RBP11.11□□□□□ -0.63
XRCC3-208ENST00000554811 TMEM163Q8TC26 289 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 SLC7A6Q92536 515 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 RFKQ969G6 155 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 TRIM43Q96BQ3 446 aaPredicted RBP11.11□□□□□ -0.63
XRCC3-208ENST00000554811 SLC41A3Q96GZ6 507 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 RAD9AQ99638 391 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 CCDC3Q9BQI4 270 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 MKRN2Q9H000 416 aaKnown RBP11.11□□□□□ -0.63
XRCC3-208ENST00000554811 A4GALTQ9NPC4 353 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 NUDT15Q9NV35 164 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 PRELID1Q9Y255 219 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 TP53BP1Q12888 1972 aaPredicted RBP11.11□□□□□ -0.63
XRCC3-208ENST00000554811 LRIT2A6NDA9 550 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 POLR1CO15160 346 aaPredicted RBP11.11□□□□□ -0.63
XRCC3-208ENST00000554811 SNRNP200O75643 2136 aaKnown RBP11.11□□□□□ -0.63
XRCC3-208ENST00000554811 AGERQ15109 404 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 FAM78AQ5JUQ0 283 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 LILRA6Q6PI73 481 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 LYPD8Q6UX82 237 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 GPR155Q7Z3F1 870 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 NRSN1Q8IZ57 195 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 CCL4L1Q8NHW4 92 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms