RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 BTBD10Q9BSF8 475 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 C3orf14Q9HBI5 128 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 GALNT9Q9HCQ5 603 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 CHST11Q9NPF2 352 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 ATAD3AQ9NVI7 634 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 TAGLN3Q9UI15 199 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 MRTO4Q9UKD2 239 aaKnown RBP11.93□□□□□ -0.5
SHMT2-211ENST00000554310 ACAD8Q9UKU7 415 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 ABCG2Q9UNQ0 655 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 EIF3LQ9Y262 564 aaKnown RBP11.93□□□□□ -0.5
SHMT2-211ENST00000554310 HRH3Q9Y5N1 445 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 WIF1Q9Y5W5 379 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 PKDREJQ9NTG1 2253 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 CRYBG3Q68DQ2 2970 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 C15orf38-AP3S2A0A0A6YYH1 394 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 GNB5O14775 395 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 HDAC3O15379 428 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 TRAPPC6AO75865 159 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 ATP6V1G2O95670 118 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 GABRA1P14867 456 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 PRPS1L1P21108 318 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 HTR1EP28566 365 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 TRPC1P48995 793 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 PSMD4P55036 377 aaKnown RBP11.92□□□□□ -0.5
SHMT2-211ENST00000554310 MANFP55145 182 aaKnown RBP11.92□□□□□ -0.5
SHMT2-211ENST00000554310 C21orf58P58505 322 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 EMX2Q04743 252 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 DECR1Q16698 335 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 C1orf185Q5T7R7 199 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 IL23RQ5VWK5 629 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 ZNF787Q6DD87 383 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 DESI1Q6ICB0 168 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 ZNF585AQ6P3V2 769 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 B3GNT6Q6ZMB0 384 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 TREML1Q86YW5 311 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 OR4N2Q8NGD1 307 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 ASB5Q8WWX0 329 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 RND1Q92730 232 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 HOXB13Q92826 284 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-211ENST00000554310 UTP4Q969X6 686 aaKnown RBP11.92□□□□□ -0.5
SHMT2-211ENST00000554310 EFHD2Q96C19 240 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-211ENST00000554310 SDCCAG3Q96C92 435 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 GNRHR2Q96P88 292 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 PRPF18Q99633 342 aaKnown RBP11.92□□□□□ -0.5
SHMT2-211ENST00000554310 CCDC28BQ9BUN5 200 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 EQTNQ9NQ60 294 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 NOP53Q9NZM5 478 aaKnown RBP11.92□□□□□ -0.5
SHMT2-211ENST00000554310 NTMQ9P121 344 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 ARMCX1Q9P291 453 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 TNFRSF10DQ9UBN6 386 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 CBLCQ9ULV8 474 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 MAPRE3Q9UPY8 281 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 FAM215AQ9Y5M1 114 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 CELSR2Q9HCU4 2923 aa11.92□□□□□ -0.5
SHMT2-211ENST00000554310 ARHGAP21Q5T5U3 1957 aa11.91□□□□□ -0.5
SHMT2-211ENST00000554310 FAM47E-STBD1D6RA91 191 aa11.91□□□□□ -0.5
SHMT2-211ENST00000554310 HNRNPRO43390 633 aaKnown RBP11.91□□□□□ -0.5
SHMT2-211ENST00000554310 EMC8O43402 210 aa11.91□□□□□ -0.5
SHMT2-211ENST00000554310 CBR3O75828 277 aa11.91□□□□□ -0.5
SHMT2-211ENST00000554310 PRDX6P30041 224 aa11.91□□□□□ -0.5
SHMT2-211ENST00000554310 CHRNB4P30926 498 aa11.91□□□□□ -0.5
SHMT2-211ENST00000554310 EVI2BP34910 448 aa11.91□□□□□ -0.5
SHMT2-211ENST00000554310 GCKP35557 465 aa11.91□□□□□ -0.5
SHMT2-211ENST00000554310 PRR5P85299 388 aa11.91□□□□□ -0.5
SHMT2-211ENST00000554310 CRYZQ08257 329 aaKnown RBP11.91□□□□□ -0.5
SHMT2-211ENST00000554310 TOMM20Q15388 145 aa11.91□□□□□ -0.5
SHMT2-211ENST00000554310 NHSL2Q5HYW2 709 aa11.91□□□□□ -0.5
SHMT2-211ENST00000554310 CPTPQ5TA50 214 aa11.91□□□□□ -0.5
SHMT2-211ENST00000554310 SZRD1Q7Z422 152 aa11.91□□□□□ -0.5
SHMT2-211ENST00000554310 PLCZ1Q86YW0 608 aa11.91□□□□□ -0.5
SHMT2-211ENST00000554310 RPRMLQ8N4K4 120 aa11.91□□□□□ -0.5
SHMT2-211ENST00000554310 CDRT4Q8N9R6 151 aa11.91□□□□□ -0.5
SHMT2-211ENST00000554310 WDSUB1Q8N9V3 476 aa11.91□□□□□ -0.5
SHMT2-211ENST00000554310 NUP43Q8NFH3 380 aa11.91□□□□□ -0.5
SHMT2-211ENST00000554310 OR7A2PQ8NGA2 310 aa11.91□□□□□ -0.5
SHMT2-211ENST00000554310 CA5BP1Q8WTZ4 195 aa11.91□□□□□ -0.5
SHMT2-211ENST00000554310 OR2B2Q9GZK3 357 aa11.91□□□□□ -0.5
SHMT2-211ENST00000554310 C1orf21Q9H246 121 aa11.91□□□□□ -0.5
SHMT2-211ENST00000554310 MMADHCQ9H3L0 296 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-211ENST00000554310 NEUROD4Q9HD90 331 aa11.91□□□□□ -0.5
SHMT2-211ENST00000554310 SERHLQ9NQF3 203 aa11.91□□□□□ -0.5
SHMT2-211ENST00000554310 FAM120CQ9NX05 1096 aaKnown RBP11.91□□□□□ -0.5
SHMT2-211ENST00000554310 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 A0A1W2PRB8 838 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 GYG2O15488 501 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 GSC2O15499 205 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 DIAPH2O60879 1101 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 NKX2-2O95096 273 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 KCNH1O95259 989 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 IL33O95760 270 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 LAMP1P11279 417 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 G6PDP11413 515 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 CYP4B1P13584 511 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 GRNP28799 593 aaKnown RBP11.9□□□□□ -0.5
SHMT2-211ENST00000554310 MAP3K8P41279 467 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 CLDN8P56748 225 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 NUP107P57740 925 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 GAB1Q13480 694 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 VASNQ6EMK4 673 aa11.9□□□□□ -0.5
SHMT2-211ENST00000554310 RTL6Q6ICC9 239 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms