RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 DPM1O60762 260 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 ALOX12BO75342 701 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 NADKO95544 446 aaPredicted RBP13.39□□□□□ -0.27
SHMT2-208ENST00000553868 CBX7O95931 251 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 RECKO95980 971 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 SERPINA1P01009 418 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 BCHEP06276 602 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 TFPTP0C1Z6 253 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 CT62P0C5K7 136 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 FCGR1AP12314 374 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 CLCN2P51788 898 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 CHRNB3Q05901 458 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 MYBPC3Q14896 1274 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 EXOSC7Q15024 291 aaKnown RBP13.39□□□□□ -0.27
SHMT2-208ENST00000553868 MRPL14Q6P1L8 145 aaKnown RBP13.39□□□□□ -0.27
SHMT2-208ENST00000553868 MORN4Q8NDC4 146 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 FDCSPQ8NFU4 85 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 CT55Q8WUE5 264 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 SLC38A5Q8WUX1 472 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 PYDC1Q8WXC3 89 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 LZICQ8WZA0 190 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 SLC9A6Q92581 669 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 MAL2Q969L2 176 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 C16orf58Q96GQ5 468 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 YIPF4Q9BSR8 244 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 SPATA5L1Q9BVQ7 753 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 NUDT9Q9BW91 350 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 PIGUQ9H490 435 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 SERHL2Q9H4I8 314 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 TRIM45Q9H8W5 580 aaPredicted RBP13.39□□□□□ -0.27
SHMT2-208ENST00000553868 CACYBPQ9HB71 228 aaKnown RBP13.39□□□□□ -0.27
SHMT2-208ENST00000553868 DUSP22Q9NRW4 184 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 CCM2LQ9NUG4 571 aaPredicted RBP13.39□□□□□ -0.27
SHMT2-208ENST00000553868 STX18Q9P2W9 335 aaKnown RBP13.39□□□□□ -0.27
SHMT2-208ENST00000553868 COPS7AQ9UBW8 275 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 C3orf18Q9UK00 162 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 PADI1Q9ULC6 663 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 ERVK-19Q9WJR5 959 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 AP4S1Q9Y587 144 aa13.39□□□□□ -0.27
SHMT2-208ENST00000553868 NUP210LQ5VU65 1888 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 OR2W5A6NFC9 320 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 H0Y3Z8 333 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 SERPINB7O75635 380 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 IGHEP01854 428 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 S1PR1P21453 382 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 MAN2A2P49641 1150 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 NCF4Q15080 339 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 GPAT3Q53EU6 434 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 CRB2Q5IJ48 1285 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 TBCELQ5QJ74 424 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 FAM198BQ6UWH4 519 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 DGAT2L6Q6ZPD8 337 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 EIF3MQ7L2H7 374 aaKnown RBP13.38□□□□□ -0.27
SHMT2-208ENST00000553868 LAPTM4BQ86VI4 370 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 SLC44A2Q8IWA5 706 aaPredicted RBP13.38□□□□□ -0.27
SHMT2-208ENST00000553868 ADGRG5Q8IZF4 528 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 OR5D16Q8NGK9 328 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 PTPMT1Q8WUK0 201 aaPredicted RBP13.38□□□□□ -0.27
SHMT2-208ENST00000553868 CANT1Q8WVQ1 401 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 RASSF5Q8WWW0 418 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 TMEM19Q96HH6 336 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 SENP5Q96HI0 755 aaPredicted RBP13.38□□□□□ -0.27
SHMT2-208ENST00000553868 TRNT1Q96Q11 434 aaKnown RBP13.38□□□□□ -0.27
SHMT2-208ENST00000553868 SPSB2Q99619 263 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 OR10A5Q9H207 317 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 SOX17Q9H6I2 414 aaPredicted RBP13.38□□□□□ -0.27
SHMT2-208ENST00000553868 MAGIXQ9H6Y5 334 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 ANKRA2Q9H9E1 313 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 BCL2L10Q9HD36 194 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 ARMC1Q9NVT9 282 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 C6orf203Q9P0P8 240 aaPredicted RBP13.38□□□□□ -0.27
SHMT2-208ENST00000553868 STOML1Q9UBI4 398 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 AURKCQ9UQB9 309 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 NTNG1Q9Y2I2 539 aa13.38□□□□□ -0.27
SHMT2-208ENST00000553868 A0A0G2JPF8 293 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 A6NL46 340 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 A8MUA0 341 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 HNRNPCL2B2RXH8 293 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 HNRNPCL3B7ZW38 293 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 PGM3O95394 542 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 ZNF682O95780 498 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 BAG2O95816 211 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 RAB40ALP0C0E4 278 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 HNRNPCL4P0DMR1 293 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 RAP2AP10114 183 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 ACP2P11117 423 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 ETS2P15036 469 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 ANPEPP15144 967 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 SOX18P35713 384 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 PCBP3P57721 371 aaKnown RBP13.37□□□□□ -0.27
SHMT2-208ENST00000553868 SLC34A1Q06495 639 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 IL10RAQ13651 578 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 RAPSNQ13702 412 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 EXOSC6Q5RKV6 272 aaKnown RBP13.37□□□□□ -0.27
SHMT2-208ENST00000553868 HEPHL1Q6MZM0 1159 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 RNF111Q6ZNA4 994 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 SHISA6Q6ZSJ9 500 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 CBLL1Q75N03 491 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 ANKRD37Q7Z713 158 aa13.37□□□□□ -0.27
SHMT2-208ENST00000553868 COX18Q8N8Q8 333 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms