RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 ECSITQ9BQ95 431 aa16.57■□□□□ 0.24
PSEN1-208ENST00000553719 BCL2L10Q9HD36 194 aa16.57■□□□□ 0.24
PSEN1-208ENST00000553719 POLE3Q9NRF9 147 aa16.57■□□□□ 0.24
PSEN1-208ENST00000553719 HPF1Q9NWY4 346 aa16.57■□□□□ 0.24
PSEN1-208ENST00000553719 FLRT3Q9NZU0 649 aa16.57■□□□□ 0.24
PSEN1-208ENST00000553719 CD300AQ9UGN4 299 aa16.57■□□□□ 0.24
PSEN1-208ENST00000553719 MRTO4Q9UKD2 239 aaKnown RBP16.57■□□□□ 0.24
PSEN1-208ENST00000553719 USP22Q9UPT9 525 aa16.57■□□□□ 0.24
PSEN1-208ENST00000553719 ZNF451Q9Y4E5 1061 aa16.57■□□□□ 0.24
PSEN1-208ENST00000553719 PCDHGA10Q9Y5H3 936 aa16.57■□□□□ 0.24
PSEN1-208ENST00000553719 CSAG2Q9Y5P2 127 aa16.57■□□□□ 0.24
PSEN1-208ENST00000553719 PRORSD1PA6NEY8 169 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 FADS1O60427 444 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 ICOSLGO75144 302 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 STX11O75558 287 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 ATP5HO75947 161 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 F10P00742 488 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 BCHEP06276 602 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 NGFRP08138 427 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 IL12BP29460 328 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 PCGF2P35227 344 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 GSK3BP49841 420 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 TNFSF10P50591 281 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 PCBP3P57721 371 aaKnown RBP16.56■□□□□ 0.24
PSEN1-208ENST00000553719 MXRA7P84157 204 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 CDK6Q00534 326 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 LIPEQ05469 1076 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 EFR3AQ14156 821 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 OR1C1Q15619 314 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 ZNF630Q2M218 657 aaPredicted RBP16.56■□□□□ 0.24
PSEN1-208ENST00000553719 BNC2Q6ZN30 1099 aaPredicted RBP16.56■□□□□ 0.24
PSEN1-208ENST00000553719 RTL4Q6ZR62 310 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 MDGA2Q7Z553 956 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 HPS6Q86YV9 775 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 EXD3Q8N9H8 876 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 SPPL2AQ8TCT8 520 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 NODALQ96S42 347 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 TREX2Q9BQ50 279 aaPredicted RBP16.56■□□□□ 0.24
PSEN1-208ENST00000553719 ALG2Q9H553 416 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 LRFN1Q9P244 771 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 KCNE5Q9UJ90 142 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 CNOT11Q9UKZ1 510 aaKnown RBP16.56■□□□□ 0.24
PSEN1-208ENST00000553719 TP53TG5Q9Y2B4 290 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 L3MBTL1Q9Y468 752 aa16.56■□□□□ 0.24
PSEN1-208ENST00000553719 CENPVL1A0A0U1RR11 272 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 ERVH48-1M5A8F1 160 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 DNAJA2O60884 412 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 GCM2O75603 506 aaPredicted RBP16.55■□□□□ 0.24
PSEN1-208ENST00000553719 CCL3P10147 92 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 NR2F1P10589 423 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 HSD17B1P14061 328 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 RPS4Y1P22090 263 aaKnown RBP16.55■□□□□ 0.24
PSEN1-208ENST00000553719 KRT20P35900 424 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 CASRP41180 1078 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 PTGDSP41222 190 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 CRISP3P54108 245 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 NCALDP61601 193 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 CHRNEQ04844 493 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 CEACAM7Q14002 265 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 SCARB2Q14108 478 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 VMACQ2NL98 169 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 GRAMD1BQ3KR37 738 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 SPINK14Q6IE38 97 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 FBXW8Q8N3Y1 598 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 C11orf65Q8NCR3 313 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 PSD4Q8NDX1 1056 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 OR2T12Q8NG77 320 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 NFKBIDQ8NI38 313 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 OIT3Q8WWZ8 545 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 TM9SF4Q92544 642 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 PMM1Q92871 262 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 SCMH1Q96GD3 660 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 CDRT15Q96T59 188 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 BTBD10Q9BSF8 475 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 PROK2Q9HC23 129 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 WDR45Q9Y484 360 aa16.55■□□□□ 0.24
PSEN1-208ENST00000553719 ANKRD33BA6NCL7 494 aa16.54■□□□□ 0.24
PSEN1-208ENST00000553719 TP53I11O14683 189 aa16.54■□□□□ 0.24
PSEN1-208ENST00000553719 SLC28A2O43868 658 aa16.54■□□□□ 0.24
PSEN1-208ENST00000553719 SLC25A12O75746 678 aa16.54■□□□□ 0.24
PSEN1-208ENST00000553719 UTS2O95399 124 aa16.54■□□□□ 0.24
PSEN1-208ENST00000553719 TBXA2RP21731 343 aa16.54■□□□□ 0.24
PSEN1-208ENST00000553719 RFX3P48380 749 aa16.54■□□□□ 0.24
PSEN1-208ENST00000553719 GAS1P54826 345 aa16.54■□□□□ 0.24
PSEN1-208ENST00000553719 ARG2P78540 354 aa16.54■□□□□ 0.24
PSEN1-208ENST00000553719 OC90Q02509 493 aaPredicted RBP16.54■□□□□ 0.24
PSEN1-208ENST00000553719 VEZF1Q14119 521 aa16.54■□□□□ 0.24
PSEN1-208ENST00000553719 GNA13Q14344 377 aa16.54■□□□□ 0.24
PSEN1-208ENST00000553719 ZNF141Q15928 474 aa16.54■□□□□ 0.24
PSEN1-208ENST00000553719 SPATS1Q496A3 300 aa16.54■□□□□ 0.24
PSEN1-208ENST00000553719 GPAT3Q53EU6 434 aa16.54■□□□□ 0.24
PSEN1-208ENST00000553719 LACTB2Q53H82 288 aaPredicted RBP16.54■□□□□ 0.24
PSEN1-208ENST00000553719 RPS26P11Q5JNZ5 115 aaPredicted RBP16.54■□□□□ 0.24
PSEN1-208ENST00000553719 SAMD4BQ5PRF9 694 aaKnown RBP16.54■□□□□ 0.24
PSEN1-208ENST00000553719 REEP3Q6NUK4 255 aa16.54■□□□□ 0.24
PSEN1-208ENST00000553719 ERICH5Q6P6B1 374 aa16.54■□□□□ 0.24
PSEN1-208ENST00000553719 APOOLQ6UXV4 268 aa16.54■□□□□ 0.24
PSEN1-208ENST00000553719 Q6ZS92 163 aa16.54■□□□□ 0.24
PSEN1-208ENST00000553719 ARHGAP24Q8N264 748 aa16.54■□□□□ 0.24
PSEN1-208ENST00000553719 ZNF619Q8N2I2 560 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms