RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 SDHAF3Q9NRP4 125 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 SLC6A13Q9NSD5 602 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 THUMPD1Q9NXG2 353 aaKnown RBP12.69□□□□□ -0.38
TUBB3-202ENST00000553656 TUBA8Q9NY65 449 aaPredicted RBP12.69□□□□□ -0.38
TUBB3-202ENST00000553656 CORO2BQ9UQ03 480 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 LIPT1Q9Y234 373 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 NUP214P35658 2090 aaPredicted RBP12.69□□□□□ -0.38
TUBB3-202ENST00000553656 EXPH5Q8NEV8 1989 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 LOC100653049A0A140TA62 436 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 PINLYPA6NC86 204 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 SCDO00767 359 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 MRASO14807 208 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 SCO2O43819 266 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 STX11O75558 287 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 DCTN3O75935 186 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 KRT34O76011 436 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 IGKV1D-16P01601 117 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 CD1EP15812 388 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 ELAVL4P26378 380 aaKnown RBP12.68□□□□□ -0.38
TUBB3-202ENST00000553656 PTPN6P29350 595 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 DSTNP60981 165 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 PPIAP62937 165 aaKnown RBP12.68□□□□□ -0.38
TUBB3-202ENST00000553656 FADDQ13158 208 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 GRAMD1BQ3KR37 738 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 ARHGAP11BQ3KRB8 267 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 FLYWCH1Q4VC44 716 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 COQ5Q5HYK3 327 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.68□□□□□ -0.38
TUBB3-202ENST00000553656 DPP10Q8N608 796 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 RP9Q8TA86 221 aaKnown RBP12.68□□□□□ -0.38
TUBB3-202ENST00000553656 TMEM41AQ96HV5 264 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 LRRC37BQ96QE4 947 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 TTTY12Q9BZ98 90 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 HOXD1Q9GZZ0 328 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 HHATLQ9HCP6 504 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 GALNT9Q9HCQ5 603 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 UBQLN4Q9NRR5 601 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 VAPAQ9P0L0 249 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 P2RX2Q9UBL9 471 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 NTNG1Q9Y2I2 539 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 WIF1Q9Y5W5 379 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 KCNE3Q9Y6H6 103 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 BOD1L1Q8NFC6 3051 aa12.68□□□□□ -0.38
TUBB3-202ENST00000553656 FAM166BA8MTA8 275 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 NPIPA5E9PKD4 350 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 H3BNH8 94 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 HMGN4O00479 90 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 UNC5CO95185 931 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 NGFRP08138 427 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 NR2F1P10589 423 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 ETFAP13804 333 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 TBXA2RP21731 343 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 ELOAQ14241 798 aaKnown RBP12.67□□□□□ -0.38
TUBB3-202ENST00000553656 GNA13Q14344 377 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 TRMT5Q32P41 509 aaKnown RBP12.67□□□□□ -0.38
TUBB3-202ENST00000553656 COX20Q5RI15 118 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 REP15Q6BDI9 236 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 HEPHL1Q6MZM0 1159 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 RETREG3Q86VR2 466 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 FAM109AQ8N4B1 249 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 ANKS4BQ8N8V4 417 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 CCDC197Q8NCU1 140 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 CHDHQ8NE62 594 aaPredicted RBP12.67□□□□□ -0.38
TUBB3-202ENST00000553656 OR1J4Q8NGS1 313 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 ROPN1LQ96C74 230 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 CMTM5Q96DZ9 223 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 SDF2Q99470 211 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 CCDC106Q9BWC9 280 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 TSPAN10Q9H1Z9 355 aaPredicted RBP12.67□□□□□ -0.38
TUBB3-202ENST00000553656 CACYBPQ9HB71 228 aaKnown RBP12.67□□□□□ -0.38
TUBB3-202ENST00000553656 PROK2Q9HC23 129 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 POLE3Q9NRF9 147 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 GID8Q9NWU2 228 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 SLC25A37Q9NYZ2 338 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 FLRT3Q9NZU0 649 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 SLAMF8Q9P0V8 285 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 PPP4R1LQ9P1A2 415 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 NPIPA1Q9UND3 350 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 WDR45Q9Y484 360 aa12.67□□□□□ -0.38
TUBB3-202ENST00000553656 C2orf72A6NCS6 295 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 NDUFAB1O14561 156 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 GNB5O14775 395 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 SNPHO15079 494 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 NDUFB5O43674 189 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 TRIM3O75382 744 aaPredicted RBP12.66□□□□□ -0.38
TUBB3-202ENST00000553656 GLSO94925 669 aaPredicted RBP12.66□□□□□ -0.38
TUBB3-202ENST00000553656 OXSR1O95747 527 aaPredicted RBP12.66□□□□□ -0.38
TUBB3-202ENST00000553656 NPPAP01160 153 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 C1QCP02747 245 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 COX4I1P13073 169 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 EDN3P14138 238 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 HOXB9P17482 250 aaPredicted RBP12.66□□□□□ -0.38
TUBB3-202ENST00000553656 GDF1P27539 372 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 DCTP40126 519 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 ATP12AP54707 1039 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 FOXO1Q12778 655 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 TOMM20Q15388 145 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 RGNQ15493 299 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 GPR68Q15743 365 aa12.66□□□□□ -0.38
TUBB3-202ENST00000553656 GCNT6Q5T4J0 391 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms