RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 CHEK2O96017 543 aa16.5■□□□□ 0.23
SHMT2-206ENST00000553529 POU3F2P20265 443 aaPredicted RBP16.5■□□□□ 0.23
SHMT2-206ENST00000553529 BGNP21810 368 aa16.5■□□□□ 0.23
SHMT2-206ENST00000553529 SRD5A2P31213 254 aa16.5■□□□□ 0.23
SHMT2-206ENST00000553529 SUCLG1P53597 346 aaKnown RBP16.5■□□□□ 0.23
SHMT2-206ENST00000553529 MANFP55145 182 aaKnown RBP16.5■□□□□ 0.23
SHMT2-206ENST00000553529 ARSKQ6UWY0 536 aa16.5■□□□□ 0.23
SHMT2-206ENST00000553529 LACC1Q8IV20 430 aa16.5■□□□□ 0.23
SHMT2-206ENST00000553529 NUDCD3Q8IVD9 361 aa16.5■□□□□ 0.23
SHMT2-206ENST00000553529 OR4K17Q8NGC6 315 aa16.5■□□□□ 0.23
SHMT2-206ENST00000553529 OR4C3Q8NH37 302 aa16.5■□□□□ 0.23
SHMT2-206ENST00000553529 DUSP19Q8WTR2 217 aa16.5■□□□□ 0.23
SHMT2-206ENST00000553529 HOXB13Q92826 284 aaPredicted RBP16.5■□□□□ 0.23
SHMT2-206ENST00000553529 FAM120BQ96EK7 910 aaKnown RBP16.5■□□□□ 0.23
SHMT2-206ENST00000553529 C14orf79Q96F83 325 aa16.5■□□□□ 0.23
SHMT2-206ENST00000553529 SORT1Q99523 831 aa16.5■□□□□ 0.23
SHMT2-206ENST00000553529 LIME1Q9H400 295 aa16.5■□□□□ 0.23
SHMT2-206ENST00000553529 CXorf36Q9H7Y0 433 aa16.5■□□□□ 0.23
SHMT2-206ENST00000553529 MCCC2Q9HCC0 563 aa16.5■□□□□ 0.23
SHMT2-206ENST00000553529 Q9N2J8 555 aa16.5■□□□□ 0.23
SHMT2-206ENST00000553529 POLQO75417 2590 aa16.49■□□□□ 0.23
SHMT2-206ENST00000553529 MBD3L4A6NDZ8 208 aaPredicted RBP16.49■□□□□ 0.23
SHMT2-206ENST00000553529 MBD3L3A6NE82 208 aaPredicted RBP16.49■□□□□ 0.23
SHMT2-206ENST00000553529 MBD3L5A6NJ08 208 aaPredicted RBP16.49■□□□□ 0.23
SHMT2-206ENST00000553529 ESPNB1AK53 854 aa16.49■□□□□ 0.23
SHMT2-206ENST00000553529 RGS16O15492 202 aaPredicted RBP16.49■□□□□ 0.23
SHMT2-206ENST00000553529 C6orf47O95873 294 aa16.49■□□□□ 0.23
SHMT2-206ENST00000553529 OPN1LWP04000 364 aa16.49■□□□□ 0.23
SHMT2-206ENST00000553529 G6PDP11413 515 aa16.49■□□□□ 0.23
SHMT2-206ENST00000553529 PRPS2P11908 318 aa16.49■□□□□ 0.23
SHMT2-206ENST00000553529 HK1P19367 917 aa16.49■□□□□ 0.23
SHMT2-206ENST00000553529 SSTR2P30874 369 aa16.49■□□□□ 0.23
SHMT2-206ENST00000553529 MYBPHQ13203 477 aa16.49■□□□□ 0.23
SHMT2-206ENST00000553529 DECR1Q16698 335 aa16.49■□□□□ 0.23
SHMT2-206ENST00000553529 CYP27C1Q4G0S4 372 aa16.49■□□□□ 0.23
SHMT2-206ENST00000553529 MFSD12Q6NUT3 480 aa16.49■□□□□ 0.23
SHMT2-206ENST00000553529 FNDC5Q8NAU1 212 aa16.49■□□□□ 0.23
SHMT2-206ENST00000553529 OR5AK3PQ8NH89 298 aa16.49■□□□□ 0.23
SHMT2-206ENST00000553529 MBD3L2Q8NHZ7 208 aaPredicted RBP16.49■□□□□ 0.23
SHMT2-206ENST00000553529 TUBGCP3Q96CW5 907 aa16.49■□□□□ 0.23
SHMT2-206ENST00000553529 RUBCNLQ9H714 662 aa16.49■□□□□ 0.23
SHMT2-206ENST00000553529 EML4Q9HC35 981 aaKnown RBP16.49■□□□□ 0.23
SHMT2-206ENST00000553529 CRIM1Q9NZV1 1036 aa16.49■□□□□ 0.23
SHMT2-206ENST00000553529 CLCF1Q9UBD9 225 aa16.49■□□□□ 0.23
SHMT2-206ENST00000553529 ATP6V1HQ9UI12 483 aa16.49■□□□□ 0.23
SHMT2-206ENST00000553529 PCDHGB3Q9Y5G1 929 aa16.49■□□□□ 0.23
SHMT2-206ENST00000553529 OTOGQ6ZRI0 2925 aa16.49■□□□□ 0.23
SHMT2-206ENST00000553529 HSPB2A8KAH6 182 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 SEC14L5O43304 696 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 CTIFO43310 598 aaKnown RBP16.48■□□□□ 0.23
SHMT2-206ENST00000553529 OIP5O43482 229 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 TBX19O60806 448 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 NKX2-2O95096 273 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 HSPA4LO95757 839 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 ACTL6AO96019 429 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 ZNF708P17019 499 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 TIMP3P35625 211 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 CASP9P55211 416 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 CLDN20P56880 219 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 RPS26P62854 115 aaKnown RBP16.48■□□□□ 0.23
SHMT2-206ENST00000553529 HSPB2Q16082 182 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 TNFAIP8L3Q5GJ75 292 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 EXOSC6Q5RKV6 272 aaKnown RBP16.48■□□□□ 0.23
SHMT2-206ENST00000553529 RAET1LQ5VY80 246 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 ADGRE4PQ86SQ3 457 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 TMEM200AQ86VY9 491 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 PM20D2Q8IYS1 436 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 CLECL1Q8IZS7 167 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 JADE3Q92613 823 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 CDS1Q92903 461 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 ZNF524Q96C55 264 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 INTS12Q96CB8 462 aaKnown RBP16.48■□□□□ 0.23
SHMT2-206ENST00000553529 ZNF845Q96IR2 970 aaPredicted RBP16.48■□□□□ 0.23
SHMT2-206ENST00000553529 METTL2AQ96IZ6 378 aaKnown RBP16.48■□□□□ 0.23
SHMT2-206ENST00000553529 PPP3R2Q96LZ3 170 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 SERHL2Q9H4I8 314 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 PNPOQ9NVS9 261 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 GIN1Q9NXP7 522 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 WBP11Q9Y2W2 641 aaKnown RBP16.48■□□□□ 0.23
SHMT2-206ENST00000553529 ZNF337Q9Y3M9 751 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 SNX8Q9Y5X2 465 aa16.48■□□□□ 0.23
SHMT2-206ENST00000553529 CD8B2A6NJW9 211 aa16.47■□□□□ 0.23
SHMT2-206ENST00000553529 EEF1E1-BLOC1S5C9J1V9 151 aa16.47■□□□□ 0.23
SHMT2-206ENST00000553529 C9JVG2 144 aa16.47■□□□□ 0.23
SHMT2-206ENST00000553529 H3BML4 177 aa16.47■□□□□ 0.23
SHMT2-206ENST00000553529 EEF1E1O43324 174 aaKnown RBP16.47■□□□□ 0.23
SHMT2-206ENST00000553529 KCNK2O95069 426 aa16.47■□□□□ 0.23
SHMT2-206ENST00000553529 OXSR1O95747 527 aaPredicted RBP16.47■□□□□ 0.23
SHMT2-206ENST00000553529 ANGPTL1O95841 491 aa16.47■□□□□ 0.23
SHMT2-206ENST00000553529 DHRS4L1P0CG22 281 aa16.47■□□□□ 0.23
SHMT2-206ENST00000553529 CPN1P15169 458 aa16.47■□□□□ 0.23
SHMT2-206ENST00000553529 DGKQP52824 942 aa16.47■□□□□ 0.23
SHMT2-206ENST00000553529 DIO3P55073 304 aa16.47■□□□□ 0.23
SHMT2-206ENST00000553529 LASP1Q14847 261 aaKnown RBP16.47■□□□□ 0.23
SHMT2-206ENST00000553529 CD226Q15762 336 aa16.47■□□□□ 0.23
SHMT2-206ENST00000553529 NDUFAF6Q330K2 333 aa16.47■□□□□ 0.23
SHMT2-206ENST00000553529 SLC25A35Q3KQZ1 300 aa16.47■□□□□ 0.23
SHMT2-206ENST00000553529 ATP6AP1LQ52LC2 224 aa16.47■□□□□ 0.23
SHMT2-206ENST00000553529 CNPY4Q8N129 248 aa16.47■□□□□ 0.23
SHMT2-206ENST00000553529 ANKRD42Q8N9B4 389 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms