RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 GIN1Q9NXP7 522 aa11.96□□□□□ -0.49
HNRNPC-205ENST00000553300 ASIC5Q9NY37 505 aa11.96□□□□□ -0.49
HNRNPC-205ENST00000553300 SKAP2O75563 359 aaPredicted RBP11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 DPP4P27487 766 aa11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 SLC1A6P48664 564 aa11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 PRIM2P49643 509 aa11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 RPL14P50914 215 aaKnown RBP11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 PRKAG1P54619 331 aa11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 GFRA1P56159 465 aa11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 C21orf58P58505 322 aa11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 C17orf67Q0P5P2 114 aa11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 PTGR1Q14914 329 aa11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 BCL2A1Q16548 175 aa11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 TRIM42Q8IWZ5 723 aa11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 LRRC34Q8IZ02 419 aa11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 ZNF295-AS1Q8N0V1 137 aa11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 FADS6Q8N9I5 356 aa11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 PSMA8Q8TAA3 256 aa11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 OR5P2Q8WZ92 322 aa11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 SLC9A6Q92581 669 aa11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 MOAP1Q96BY2 351 aa11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 COQ8BQ96D53 544 aa11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 NEUROD4Q9HD90 331 aa11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 EQTNQ9NQ60 294 aa11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 NOP53Q9NZM5 478 aaKnown RBP11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 DKKL1Q9UK85 242 aa11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 FBXL2Q9UKC9 423 aa11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 MED12Q93074 2177 aa11.95□□□□□ -0.5
HNRNPC-205ENST00000553300 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 MBD3L4A6NDZ8 208 aaPredicted RBP11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 MBD3L3A6NE82 208 aaPredicted RBP11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 MBD3L5A6NJ08 208 aaPredicted RBP11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 ENO4A6NNW6 628 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 ITM2AO43736 263 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 ZIC3O60481 467 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 NGFRP08138 427 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 KRT16P08779 473 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 ALOX5P09917 674 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 LAMP1P11279 417 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 CAPN3P20807 821 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 RFX3P48380 749 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 SLC18A1P54219 525 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 CLDN8P56748 225 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 STX3Q13277 289 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 OR5M10Q6IEU7 315 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 MFSD12Q6NUT3 480 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 SEM1Q6ZVN7 128 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 SZRD1Q7Z422 152 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 WDR53Q7Z5U6 358 aaPredicted RBP11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 RIMKLAQ8IXN7 391 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 DMRTC2Q8IXT2 367 aaPredicted RBP11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 ZNF781Q8N8C0 355 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 OR7A2PQ8NGA2 310 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 GOT1L1Q8NHS2 421 aaPredicted RBP11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 MBD3L2Q8NHZ7 208 aaPredicted RBP11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 FAM120BQ96EK7 910 aaKnown RBP11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 GIMAP5Q96F15 307 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 SFXN2Q96NB2 322 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 ZFP3Q96NJ6 502 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 UCN2Q96RP3 112 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 TRIB1Q96RU8 372 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 STACQ99469 402 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 TM9SF2Q99805 663 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 G6PC3Q9BUM1 346 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 C1orf50Q9BV19 199 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 TBL1XR1Q9BZK7 514 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 BHLHE41Q9C0J9 482 aaPredicted RBP11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 DSN1Q9H410 356 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 NPDC1Q9NQX5 325 aaPredicted RBP11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 DUSP22Q9NRW4 184 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 GIMAP2Q9UG22 337 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 KCNN3Q9UGI6 736 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 HAO1Q9UJM8 370 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 FOXD3Q9UJU5 478 aaPredicted RBP11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 NUP214P35658 2090 aaPredicted RBP11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 CSMD2Q7Z408 3487 aa11.94□□□□□ -0.5
HNRNPC-205ENST00000553300 IGLV3-32A0A0A0MS00 114 aa11.93□□□□□ -0.5
HNRNPC-205ENST00000553300 ALG1L2C9J202 215 aa11.93□□□□□ -0.5
HNRNPC-205ENST00000553300 H0Y3Z8 333 aa11.93□□□□□ -0.5
HNRNPC-205ENST00000553300 SYT5O00445 386 aa11.93□□□□□ -0.5
HNRNPC-205ENST00000553300 SCO2O43819 266 aa11.93□□□□□ -0.5
HNRNPC-205ENST00000553300 UTS2O95399 124 aa11.93□□□□□ -0.5
HNRNPC-205ENST00000553300 IL18BPO95998 194 aa11.93□□□□□ -0.5
HNRNPC-205ENST00000553300 TBXA2RP21731 343 aa11.93□□□□□ -0.5
HNRNPC-205ENST00000553300 OPRM1P35372 400 aa11.93□□□□□ -0.5
HNRNPC-205ENST00000553300 DIO3P55073 304 aa11.93□□□□□ -0.5
HNRNPC-205ENST00000553300 EEFSECP57772 596 aaKnown RBP11.93□□□□□ -0.5
HNRNPC-205ENST00000553300 EEF1A1P68104 462 aaKnown RBP11.93□□□□□ -0.5
HNRNPC-205ENST00000553300 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.93□□□□□ -0.5
HNRNPC-205ENST00000553300 GLYR1Q49A26 553 aaPredicted RBP11.93□□□□□ -0.5
HNRNPC-205ENST00000553300 DCST1Q5T197 706 aa11.93□□□□□ -0.5
HNRNPC-205ENST00000553300 EEF1A1P5Q5VTE0 462 aa11.93□□□□□ -0.5
HNRNPC-205ENST00000553300 HHATQ5VTY9 493 aa11.93□□□□□ -0.5
HNRNPC-205ENST00000553300 BHLHB9Q6PI77 547 aa11.93□□□□□ -0.5
HNRNPC-205ENST00000553300 CAMKMTQ7Z624 323 aa11.93□□□□□ -0.5
HNRNPC-205ENST00000553300 ADGRE4PQ86SQ3 457 aa11.93□□□□□ -0.5
HNRNPC-205ENST00000553300 LIX1LQ8IVB5 337 aa11.93□□□□□ -0.5
HNRNPC-205ENST00000553300 MISPQ8IVT2 679 aa11.93□□□□□ -0.5
HNRNPC-205ENST00000553300 SLC16A11Q8NCK7 471 aa11.93□□□□□ -0.5
HNRNPC-205ENST00000553300 TNIP2Q8NFZ5 429 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms