RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 CTIFO43310 598 aaKnown RBP6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 AQP8O94778 261 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 RCBTB2O95199 551 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 HTR3BO95264 441 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 PGRP06401 933 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 HEXAP06865 529 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 THBDP07204 575 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 CT45A8P0DMV1 189 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 CT45A9P0DMV2 189 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 CPN1P15169 458 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 FOSL1P15407 271 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 ZNF708P17019 499 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 GRK2P25098 689 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 DPP4P27487 766 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 LOXP28300 417 aaPredicted RBP6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 TYK2P29597 1187 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 PAFAH1B1P43034 410 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 GAS1P54826 345 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 GUCY2DQ02846 1103 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 IFT88Q13099 833 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 FAM83EQ2M2I3 478 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 CT45A2Q5DJT8 189 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 NHSL2Q5HYW2 709 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 ANKRD26P1Q6NSI1 321 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 LARP4Q71RC2 724 aaKnown RBP eCLIP6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 P4HA3Q7Z4N8 544 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 CAMKMTQ7Z624 323 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 MILR1Q7Z6M3 343 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 ADGRE4PQ86SQ3 457 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 EXOC3L1Q86VI1 746 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 IFNEQ86WN2 208 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 PLCZ1Q86YW0 608 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 SLC44A2Q8IWA5 706 aaPredicted RBP6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 PM20D2Q8IYS1 436 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 METTL4Q8N3J2 472 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 CDYL2Q8N8U2 506 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 OR7G2Q8NG99 324 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 ZPLD1Q8TCW7 415 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 SELENOMQ8WWX9 145 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 SLC9A6Q92581 669 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 HTRA1Q92743 480 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 APIPQ96GX9 242 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 COX4I2Q96KJ9 171 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 COL21A1Q96P44 957 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 SERPINI1Q99574 410 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 CCL19Q99731 98 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 CENPKQ9BS16 269 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 LRRC1Q9BTT6 524 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 SHCBP1LQ9BZQ2 653 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 OR2B2Q9GZK3 357 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 C12orf65Q9H3J6 166 aaKnown RBP6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 TMEM185BQ9H7F4 350 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 SSU72Q9NP77 194 aaKnown RBP6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 REV1Q9UBZ9 1251 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 TRPS1Q9UHF7 1281 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 UTS2RQ9UKP6 389 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 EIF3LQ9Y262 564 aaKnown RBP6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 DLGAP4Q9Y2H0 992 aa6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 GPR55Q9Y2T6 319 aaPredicted RBP6.16□□□□□ -1.42
PRPF40B-214ENST00000551320 A0A087X1B8 175 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 SLC22A20A6NK97 555 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 SYCE1LA8MT33 242 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 A8MT66 165 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 CAPN14A8MX76 684 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 POC1B-GALNT4F8VUJ3 575 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 CCDC188H7C350 402 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 GOLGA8RI6L899 631 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 MANBAO00462 879 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 TSPAN2O60636 221 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 NDUFS7O75251 213 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 CBR3O75828 277 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 ACTL6AO96019 429 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 IGKV1D-16P01601 117 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 JUNP05412 331 aaKnown RBP6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 HK1P19367 917 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 IL11P20809 199 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 SERPINB1P30740 379 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 UGT2B10P36537 528 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 MC3RP41968 323 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 PHEXP78562 749 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 KRTAP1-1Q07627 177 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 MAP4K2Q12851 820 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 ZNF155Q12901 538 aaPredicted RBP6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 ACAP2Q15057 778 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 PON3Q15166 354 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 CTU2Q2VPK5 515 aaKnown RBP6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 ZNF628Q5EBL2 1059 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 C6orf163Q5TEZ5 329 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 RAET1LQ5VY80 246 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 SLC30A6Q6NXT4 461 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 TMEM107Q6UX40 140 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 APOOLQ6UXV4 268 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 SYT10Q6XYQ8 523 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 NUP54Q7Z3B4 507 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 ZAR1Q86SH2 424 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 OR4K17Q8NGC6 315 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 RAB3IL1Q8TBN0 382 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 DUSP19Q8WTR2 217 aa6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 GFM2Q969S9 779 aaKnown RBP6.15□□□□□ -1.42
PRPF40B-214ENST00000551320 REPS1Q96D71 796 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms