RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 LIMS1P48059 325 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 PGDP52209 483 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 CDH12P55289 794 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 ADARB1P78563 741 aaKnown RBP11.67□□□□□ -0.54
CACNB3-217ENST00000550483 PSG6Q00889 435 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 DGCR6Q14129 220 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 DECR1Q16698 335 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 C1orf189Q5VU69 101 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 ZNF385CQ66K41 422 aaPredicted RBP11.67□□□□□ -0.54
CACNB3-217ENST00000550483 TCTN3Q6NUS6 607 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 PRR23CQ6ZRP0 262 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 COX15Q7KZN9 410 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 GRAMD2AQ8IUY3 354 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 APLFQ8IW19 511 aaPredicted RBP11.67□□□□□ -0.54
CACNB3-217ENST00000550483 OFCC1Q8IZS5 231 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 ATG16L2Q8NAA4 619 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 OR10G2Q8NGC3 310 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 C16orf52Q8NHV5 167 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 PTPMT1Q8WUK0 201 aaPredicted RBP11.67□□□□□ -0.54
CACNB3-217ENST00000550483 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.67□□□□□ -0.54
CACNB3-217ENST00000550483 LIN37Q96GY3 246 aaPredicted RBP11.67□□□□□ -0.54
CACNB3-217ENST00000550483 SENP5Q96HI0 755 aaPredicted RBP11.67□□□□□ -0.54
CACNB3-217ENST00000550483 CNBD2Q96M20 576 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 FNDC11Q9BVV2 318 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 VN1R1Q9GZP7 353 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 SMOC1Q9H4F8 434 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 ANKRA2Q9H9E1 313 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 KRCC1Q9NPI7 259 aaPredicted RBP11.67□□□□□ -0.54
CACNB3-217ENST00000550483 PNO1Q9NRX1 252 aaKnown RBP11.67□□□□□ -0.54
CACNB3-217ENST00000550483 KRT84Q9NSB2 600 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.67□□□□□ -0.54
CACNB3-217ENST00000550483 GPN3Q9UHW5 284 aaPredicted RBP11.67□□□□□ -0.54
CACNB3-217ENST00000550483 MKL2Q9ULH7 1088 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 CBLCQ9ULV8 474 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 OR10H1Q9Y4A9 318 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 TESMINQ9Y4I5 508 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 KCNE3Q9Y6H6 103 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 U3KQV3 271 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 KNL1Q8NG31 2342 aa11.67□□□□□ -0.54
CACNB3-217ENST00000550483 C9J4A7 227 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 MEN1O00255 615 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 CBFA2T3O75081 653 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 OR5F1O95221 314 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 RECKO95980 971 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 ADAP00813 363 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 HEXBP07686 556 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 LYNP07948 512 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 SSTR4P31391 388 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 IST1P53990 364 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 SLC37A1P57057 533 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 RGS8P57771 180 aaPredicted RBP11.66□□□□□ -0.54
CACNB3-217ENST00000550483 ST3GAL3Q11203 375 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 KEAP1Q14145 624 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 ZNF141Q15928 474 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 FLYWCH1Q4VC44 716 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 VWA2Q5GFL6 755 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 DCST1Q5T197 706 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 HLA-DQA1Q5Y7H0 255 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 TBPL2Q6SJ96 375 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 UGT2A3Q6UWM9 527 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 DEF8Q6ZN54 512 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 DGAT2L6Q6ZPD8 337 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 USP51Q70EK9 711 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 SLC29A4Q7RTT9 530 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 TSEN54Q7Z6J9 526 aaKnown RBP11.66□□□□□ -0.54
CACNB3-217ENST00000550483 ZNF440Q8IYI8 595 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 PARP8Q8N3A8 854 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 ZNF527Q8NB42 609 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 OR1N1Q8NGS0 311 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 SLC2A12Q8TD20 617 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 CYGBQ8WWM9 190 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 OTUB1Q96FW1 271 aaPredicted RBP11.66□□□□□ -0.54
CACNB3-217ENST00000550483 RMND5BQ96G75 393 aaPredicted RBP11.66□□□□□ -0.54
CACNB3-217ENST00000550483 ALPK1Q96QP1 1244 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 GABARAPL3Q9BY60 117 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 NMNAT1Q9HAN9 279 aaPredicted RBP11.66□□□□□ -0.54
CACNB3-217ENST00000550483 ACER3Q9NUN7 267 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 VNN3Q9NY84 501 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 TESQ9UGI8 421 aaKnown RBP11.66□□□□□ -0.54
CACNB3-217ENST00000550483 MKLN1Q9UL63 735 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 ZMIZ1Q9ULJ6 1067 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 PPIEQ9UNP9 301 aaKnown RBP11.66□□□□□ -0.54
CACNB3-217ENST00000550483 MGAT4BQ9UQ53 548 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 GPR55Q9Y2T6 319 aaPredicted RBP11.66□□□□□ -0.54
CACNB3-217ENST00000550483 ARID1BQ8NFD5 2236 aaPredicted RBP11.66□□□□□ -0.54
CACNB3-217ENST00000550483 NUP210LQ5VU65 1888 aa11.66□□□□□ -0.54
CACNB3-217ENST00000550483 NUP214P35658 2090 aaPredicted RBP11.65□□□□□ -0.54
CACNB3-217ENST00000550483 PRAMEF25A6NGN4 478 aa11.65□□□□□ -0.54
CACNB3-217ENST00000550483 TO15178 435 aa11.65□□□□□ -0.54
CACNB3-217ENST00000550483 FCMRO60667 390 aa11.65□□□□□ -0.54
CACNB3-217ENST00000550483 ALOX12BO75342 701 aa11.65□□□□□ -0.54
CACNB3-217ENST00000550483 DIRAS1O95057 198 aa11.65□□□□□ -0.54
CACNB3-217ENST00000550483 SNAP29O95721 258 aa11.65□□□□□ -0.54
CACNB3-217ENST00000550483 IGHEP01854 428 aa11.65□□□□□ -0.54
CACNB3-217ENST00000550483 CCNYL3P0C7X3 344 aa11.65□□□□□ -0.54
CACNB3-217ENST00000550483 CT45A8P0DMV1 189 aa11.65□□□□□ -0.54
CACNB3-217ENST00000550483 CT45A9P0DMV2 189 aa11.65□□□□□ -0.54
CACNB3-217ENST00000550483 EEF1A1P68104 462 aaKnown RBP11.65□□□□□ -0.54
CACNB3-217ENST00000550483 TRAM2Q15035 370 aa11.65□□□□□ -0.54
CACNB3-217ENST00000550483 SF3A2Q15428 464 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms