RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 FGFBP1Q14512 234 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 GANABQ14697 944 aaKnown RBP6.89□□□□□ -1.31
NEK3-201ENST00000550331 POU4F3Q15319 338 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 SPIN4Q56A73 249 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 ZNF678Q5SXM1 525 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 LGSNQ5TDP6 509 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 SAMD5Q5TGI4 173 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 ACSM2BQ68CK6 577 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 GALNT18Q6P9A2 607 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 NPSR1Q6W5P4 371 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 C20orf204Q6ZNR8 217 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 GPRIN3Q6ZVF9 776 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 LARP4Q71RC2 724 aaKnown RBP eCLIP6.89□□□□□ -1.31
NEK3-201ENST00000550331 FAM9CQ8IZT9 166 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 LRRC75A-AS1Q8N1F1 130 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 CDYL2Q8N8U2 506 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 FADS6Q8N9I5 356 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 OR9A2Q8NGT5 310 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 RDH11Q8TC12 318 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 DCAKDQ8WVC6 231 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 MTBPQ96DY7 904 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 C11orf24Q96F05 449 aaPredicted RBP6.89□□□□□ -1.31
NEK3-201ENST00000550331 FMO2Q99518 471 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 PIP5K1AQ99755 562 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 ANKRA2Q9H9E1 313 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 FOLH1BQ9HBA9 442 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 SLC35C2Q9NQQ7 365 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 TAS2R9Q9NYW1 312 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 SENP1Q9P0U3 644 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 PPP4R1LQ9P1A2 415 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 ABCG2Q9UNQ0 655 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 ANK3Q12955 4377 aaKnown RBP6.89□□□□□ -1.31
NEK3-201ENST00000550331 FBN1P35555 2871 aaKnown RBP6.89□□□□□ -1.31
NEK3-201ENST00000550331 A0A087WUV0 522 aaPredicted RBP6.88□□□□□ -1.31
NEK3-201ENST00000550331 A0A087WV62 115 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 CCDC151A5D8V7 595 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 POC1B-GALNT4F8VUJ3 575 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 ARHGEF9O43307 516 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 CTIFO43310 598 aaKnown RBP6.88□□□□□ -1.31
NEK3-201ENST00000550331 COQ9O75208 318 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 TGM6O95932 706 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 ENO1P06733 434 aaKnown RBP6.88□□□□□ -1.31
NEK3-201ENST00000550331 PEPDP12955 493 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 CHN1P15882 459 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 DDCP20711 480 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 HMOX2P30519 316 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 EVI2BP34910 448 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 MC3RP41968 323 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 EEFSECP57772 596 aaKnown RBP6.88□□□□□ -1.31
NEK3-201ENST00000550331 B3GALT5-AS1P59052 145 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 RAE1P78406 368 aaKnown RBP6.88□□□□□ -1.31
NEK3-201ENST00000550331 PPP2R2BQ00005 443 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 PSG6Q00889 435 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 OCRLQ01968 901 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 LCP2Q13094 533 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 WHAMMP3Q1A5X7 153 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 UNC50Q53HI1 259 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 TCHHL1Q5QJ38 904 aaPredicted RBP6.88□□□□□ -1.31
NEK3-201ENST00000550331 OR5M10Q6IEU7 315 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 OGFOD2Q6N063 350 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 TIFABQ6ZNK6 161 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 CHMP1BQ7LBR1 199 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 P4HA3Q7Z4N8 544 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 CXorf67Q86X51 503 aaPredicted RBP6.88□□□□□ -1.31
NEK3-201ENST00000550331 SLC22A9Q8IVM8 553 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 CNPY4Q8N129 248 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 OR2M3Q8NG83 312 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 OR7G2Q8NG99 324 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 OR4K17Q8NGC6 315 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 METTL6Q8TCB7 284 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 C16orf78Q8WTQ4 265 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 KAT2AQ92830 837 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 PIGTQ969N2 578 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 EXOSC8Q96B26 276 aaKnown RBP6.88□□□□□ -1.31
NEK3-201ENST00000550331 EFHD2Q96C19 240 aaPredicted RBP6.88□□□□□ -1.31
NEK3-201ENST00000550331 STARD4Q96DR4 205 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 APIPQ96GX9 242 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 TMEM237Q96Q45 408 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 ACPTQ9BZG2 426 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 SDHAF3Q9NRP4 125 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 SIRT5Q9NXA8 310 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 ELOVL5Q9NYP7 299 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 ZNF226Q9NYT6 803 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 ZNF175Q9Y473 711 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 OR10H1Q9Y4A9 318 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 MXRA5Q9NR99 2828 aa6.88□□□□□ -1.31
NEK3-201ENST00000550331 CHD3Q12873 2000 aaKnown RBP6.88□□□□□ -1.31
NEK3-201ENST00000550331 EXOC1LA0A1B0GW35 172 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 SERTM1A2A2V5 107 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 DEFB108AA8MXU0 73 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 MYO1GB0I1T2 1018 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 B4DXG7 233 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 EMC8O43402 210 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 DLX3O60479 287 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 TNFRSF21O75509 655 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 SMNDC1O75940 238 aaKnown RBP eCLIP6.87□□□□□ -1.31
NEK3-201ENST00000550331 PSMG1O95456 288 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 ABHD2P08910 425 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 ANXA4P09525 319 aaPredicted RBP6.87□□□□□ -1.31
NEK3-201ENST00000550331 IFI6P09912 130 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms