RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 ADORA2A-AS1P86434 159 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 ELOAQ14241 798 aaKnown RBP10.22□□□□□ -0.77
RAB5B-208ENST00000550283 CYP27C1Q4G0S4 372 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 C4orf17Q53FE4 359 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 WIPI1Q5MNZ9 446 aaPredicted RBP10.22□□□□□ -0.77
RAB5B-208ENST00000550283 COX20Q5RI15 118 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.22□□□□□ -0.77
RAB5B-208ENST00000550283 TIGD3Q6B0B8 471 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 TMEM81Q6P7N7 255 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 PLXDC2Q6UX71 529 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 DNAJC14Q6Y2X3 702 aaPredicted RBP10.22□□□□□ -0.77
RAB5B-208ENST00000550283 C6orf120Q7Z4R8 191 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 CPLX4Q7Z7G2 160 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 HMGN2P46Q86SG4 172 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 YRDCQ86U90 279 aaKnown RBP10.22□□□□□ -0.77
RAB5B-208ENST00000550283 CD163Q86VB7 1156 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 SLC22A16Q86VW1 577 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 DND1Q8IYX4 353 aaKnown RBP10.22□□□□□ -0.77
RAB5B-208ENST00000550283 GHDCQ8N2G8 530 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 CDRT4Q8N9R6 151 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 GATSQ8NAP1 163 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 OR5M9Q8NGP3 310 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 CEP70Q8NHQ1 597 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 JADE3Q92613 823 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 RELTQ969Z4 430 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 CHMP6Q96FZ7 201 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 TMEM41AQ96HV5 264 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 ZNF597Q96LX8 424 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 CCDC115Q96NT0 180 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 PSMG3-AS1Q96PY0 264 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 OR7D2Q96RA2 312 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 SECISBP2Q96T21 854 aaKnown RBP10.22□□□□□ -0.77
RAB5B-208ENST00000550283 ZNF385DQ9H6B1 395 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 CCDC134Q9H6E4 229 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 NPHS2Q9NP85 383 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 TCF7L2Q9NQB0 619 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 PNPLA3Q9NST1 481 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 ATAD3AQ9NVI7 634 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 GIN1Q9NXP7 522 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 KCNE5Q9UJ90 142 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 DCTN4Q9UJW0 460 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 ANKRD17O75179 2603 aaKnown RBP10.22□□□□□ -0.77
RAB5B-208ENST00000550283 DOPEY1Q5JWR5 2465 aa10.22□□□□□ -0.77
RAB5B-208ENST00000550283 KIAA1549Q9HCM3 1950 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 PCNX3Q9H6A9 2034 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 RNF103-CHMP3A0A140T963 221 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 A0A1B0GVC2 190 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 PRSS51A0A1B0GVH4 220 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 A1L4Q6 167 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 CAPN14A8MX76 684 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 SHISA8B8ZZ34 492 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 GMFGO60234 142 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 BCAS1O75363 584 aaPredicted RBP10.21□□□□□ -0.77
RAB5B-208ENST00000550283 SLC22A3O75751 556 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 PGRP06401 933 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 VIMP08670 466 aaKnown RBP10.21□□□□□ -0.77
RAB5B-208ENST00000550283 HOXB9P17482 250 aaPredicted RBP10.21□□□□□ -0.77
RAB5B-208ENST00000550283 DRD4P21917 467 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 GDF1P27539 372 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 COL8A1P27658 744 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 IL12BP29460 328 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 S100A3P33764 101 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 EVI2BP34910 448 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 MVDP53602 400 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 PLAURQ03405 335 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 STX5Q13190 355 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 MAPK11Q15759 364 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 CD226Q15762 336 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 NDUFAF6Q330K2 333 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 SPDYE7PQ495Y7 208 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 TIGD2Q4W5G0 525 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 KRTCAP3Q53RY4 240 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 SAXO2Q658L1 398 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 RTL6Q6ICC9 239 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 CDC73Q6P1J9 531 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 HOMEZQ8IX15 550 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 KIRREL3Q8IZU9 778 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 C10orf111Q8N326 155 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 FAM57AQ8TBR7 257 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 SFXN5Q8TD22 340 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 RAB8BQ92930 207 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 AURKBQ96GD4 344 aaPredicted RBP10.21□□□□□ -0.77
RAB5B-208ENST00000550283 CCDC120Q96HB5 630 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 PRPF18Q99633 342 aaKnown RBP10.21□□□□□ -0.77
RAB5B-208ENST00000550283 C3orf14Q9HBI5 128 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 Q9N2J8 555 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 FGFR1OP2Q9NVK5 253 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 KLRF1Q9NZS2 232 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 MED11Q9P086 117 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 PRDM4Q9UKN5 801 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 BOKQ9UMX3 212 aaPredicted RBP10.21□□□□□ -0.77
RAB5B-208ENST00000550283 SLC5A6Q9Y289 635 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 WIF1Q9Y5W5 379 aa10.21□□□□□ -0.77
RAB5B-208ENST00000550283 FREM3P0C091 2139 aa10.21□□□□□ -0.78
RAB5B-208ENST00000550283 MYO9AB2RTY4 2548 aa10.2□□□□□ -0.78
RAB5B-208ENST00000550283 CCL21O00585 134 aa10.2□□□□□ -0.78
RAB5B-208ENST00000550283 ZIC3O60481 467 aa10.2□□□□□ -0.78
RAB5B-208ENST00000550283 FCMRO60667 390 aa10.2□□□□□ -0.78
RAB5B-208ENST00000550283 SNX4O95219 450 aa10.2□□□□□ -0.78
RAB5B-208ENST00000550283 OXSR1O95747 527 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms