RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.3□□□□□ -0.6
LETMD1-222ENST00000550274 SHISA8B8ZZ34 492 aa11.3□□□□□ -0.6
LETMD1-222ENST00000550274 TRIM49D1C9J1S8 452 aa11.3□□□□□ -0.6
LETMD1-222ENST00000550274 KLF4O43474 513 aa11.3□□□□□ -0.6
LETMD1-222ENST00000550274 SUPT7LO94864 414 aa11.3□□□□□ -0.6
LETMD1-222ENST00000550274 KRT6AP02538 564 aa11.3□□□□□ -0.6
LETMD1-222ENST00000550274 KRT6BP04259 564 aa11.3□□□□□ -0.6
LETMD1-222ENST00000550274 TBXA2RP21731 343 aa11.3□□□□□ -0.6
LETMD1-222ENST00000550274 TIA1P31483 386 aaKnown RBP eCLIP11.3□□□□□ -0.6
LETMD1-222ENST00000550274 KRT6CP48668 564 aa11.3□□□□□ -0.6
LETMD1-222ENST00000550274 SERPINB9P50453 376 aa11.3□□□□□ -0.6
LETMD1-222ENST00000550274 EEFSECP57772 596 aaKnown RBP11.3□□□□□ -0.6
LETMD1-222ENST00000550274 MRPS22P82650 360 aaKnown RBP11.3□□□□□ -0.6
LETMD1-222ENST00000550274 GANABQ14697 944 aaKnown RBP11.3□□□□□ -0.6
LETMD1-222ENST00000550274 RASA2Q15283 850 aa11.3□□□□□ -0.6
LETMD1-222ENST00000550274 EXOC3L2Q2M3D2 409 aa11.3□□□□□ -0.6
LETMD1-222ENST00000550274 ZNF572Q7Z3I7 529 aaPredicted RBP11.3□□□□□ -0.6
LETMD1-222ENST00000550274 GGNQ86UU5 652 aa11.3□□□□□ -0.6
LETMD1-222ENST00000550274 SAMD14Q8IZD0 417 aaPredicted RBP11.3□□□□□ -0.6
LETMD1-222ENST00000550274 LRRN4CLQ8ND94 238 aa11.3□□□□□ -0.6
LETMD1-222ENST00000550274 DCAKDQ8WVC6 231 aa11.3□□□□□ -0.6
LETMD1-222ENST00000550274 C11orf24Q96F05 449 aaPredicted RBP11.3□□□□□ -0.6
LETMD1-222ENST00000550274 TMEM237Q96Q45 408 aa11.3□□□□□ -0.6
LETMD1-222ENST00000550274 ZNF382Q96SR6 550 aa11.3□□□□□ -0.6
LETMD1-222ENST00000550274 KLHL4Q9C0H6 718 aa11.3□□□□□ -0.6
LETMD1-222ENST00000550274 GIMAP4Q9NUV9 329 aa11.3□□□□□ -0.6
LETMD1-222ENST00000550274 DMGDHQ9UI17 866 aaKnown RBP11.3□□□□□ -0.6
LETMD1-222ENST00000550274 PROCRQ9UNN8 238 aa11.3□□□□□ -0.6
LETMD1-222ENST00000550274 ABCG2Q9UNQ0 655 aa11.3□□□□□ -0.6
LETMD1-222ENST00000550274 NUP214P35658 2090 aaPredicted RBP11.29□□□□□ -0.6
LETMD1-222ENST00000550274 MYO1GB0I1T2 1018 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 POC1B-GALNT4F8VUJ3 575 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 GMFGO60234 142 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 COQ9O75208 318 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 ULK1O75385 1050 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 PSMG1O95456 288 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 PLAUP00749 431 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 JUNP05412 331 aaKnown RBP11.29□□□□□ -0.6
LETMD1-222ENST00000550274 HMOX2P30519 316 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 CASQ1P31415 396 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 MPIP34949 423 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 SLC6A8P48029 635 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 PPP2R2BQ00005 443 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 ACSM2AQ08AH3 577 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 CAPRIN1Q14444 709 aaKnown RBP11.29□□□□□ -0.6
LETMD1-222ENST00000550274 HEPACAMQ14CZ8 416 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 TMEM44Q2T9K0 475 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 CYP27C1Q4G0S4 372 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 SPIN4Q56A73 249 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 ZNF678Q5SXM1 525 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 TEX35Q5T0J7 233 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 ACSM2BQ68CK6 577 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 C8orf74Q6P047 294 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 GALNT18Q6P9A2 607 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 TMEM107Q6UX40 140 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 GPRIN3Q6ZVF9 776 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 PLEKHM3Q6ZWE6 761 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 FAM214BQ7L5A3 538 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 MARCH3Q86UD3 253 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 RELL1Q8IUW5 271 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 C17orf53Q8N3J3 647 aaPredicted RBP11.29□□□□□ -0.6
LETMD1-222ENST00000550274 METTL25Q8N6Q8 603 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 METTL6Q8TCB7 284 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 DUSP19Q8WTR2 217 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 CAVIN3Q969G5 261 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 BBS4Q96RK4 519 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 KCNA7Q96RP8 456 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 STMN4Q9H169 189 aaPredicted RBP11.29□□□□□ -0.6
LETMD1-222ENST00000550274 SDHAF3Q9NRP4 125 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 FAM120CQ9NX05 1096 aaKnown RBP11.29□□□□□ -0.6
LETMD1-222ENST00000550274 CLEC4AQ9UMR7 237 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 PLCE1Q9P212 2302 aa11.29□□□□□ -0.6
LETMD1-222ENST00000550274 YLPM1P49750 1951 aaKnown RBP11.28□□□□□ -0.6
LETMD1-222ENST00000550274 A0A087WV62 115 aa11.28□□□□□ -0.6
LETMD1-222ENST00000550274 LINC01387J3KSC0 135 aa11.28□□□□□ -0.6
LETMD1-222ENST00000550274 UPK1AO00322 258 aa11.28□□□□□ -0.6
LETMD1-222ENST00000550274 DLX3O60479 287 aa11.28□□□□□ -0.6
LETMD1-222ENST00000550274 IL33O95760 270 aa11.28□□□□□ -0.6
LETMD1-222ENST00000550274 ANXA4P09525 319 aaPredicted RBP11.28□□□□□ -0.6
LETMD1-222ENST00000550274 NID1P14543 1247 aa11.28□□□□□ -0.6
LETMD1-222ENST00000550274 PAX1P15863 534 aa11.28□□□□□ -0.6
LETMD1-222ENST00000550274 RFX3P48380 749 aa11.28□□□□□ -0.6
LETMD1-222ENST00000550274 NCBP2P52298 156 aaKnown RBP eCLIP11.28□□□□□ -0.6
LETMD1-222ENST00000550274 RPS3AP61247 264 aaKnown RBP11.28□□□□□ -0.6
LETMD1-222ENST00000550274 BTKQ06187 659 aa11.28□□□□□ -0.6
LETMD1-222ENST00000550274 KRTAP1-1Q07627 177 aa11.28□□□□□ -0.6
LETMD1-222ENST00000550274 FGFBP1Q14512 234 aa11.28□□□□□ -0.6
LETMD1-222ENST00000550274 DECR1Q16698 335 aa11.28□□□□□ -0.6
LETMD1-222ENST00000550274 BEX5Q5H9J7 111 aa11.28□□□□□ -0.6
LETMD1-222ENST00000550274 LGSNQ5TDP6 509 aa11.28□□□□□ -0.6
LETMD1-222ENST00000550274 PPP4R4Q6NUP7 873 aa11.28□□□□□ -0.6
LETMD1-222ENST00000550274 APOOLQ6UXV4 268 aa11.28□□□□□ -0.6
LETMD1-222ENST00000550274 SYT10Q6XYQ8 523 aa11.28□□□□□ -0.6
LETMD1-222ENST00000550274 STAC2Q6ZMT1 411 aa11.28□□□□□ -0.6
LETMD1-222ENST00000550274 ZNF704Q6ZNC4 412 aaPredicted RBP11.28□□□□□ -0.6
LETMD1-222ENST00000550274 CXXC5Q7LFL8 322 aaKnown RBP11.28□□□□□ -0.6
LETMD1-222ENST00000550274 CDC26Q8NHZ8 85 aa11.28□□□□□ -0.6
LETMD1-222ENST00000550274 GFM2Q969S9 779 aaKnown RBP11.28□□□□□ -0.6
LETMD1-222ENST00000550274 NPAS1Q99742 590 aa11.28□□□□□ -0.6
LETMD1-222ENST00000550274 PTGES2Q9H7Z7 377 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms