RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 OR12D1P0DN82 309 aa20.59■□□□□ 0.89
BRF1-216ENST00000550208 PTPN6P29350 595 aa20.59■□□□□ 0.89
BRF1-216ENST00000550208 EVI2BP34910 448 aa20.59■□□□□ 0.89
BRF1-216ENST00000550208 HSF1Q00613 529 aa20.59■□□□□ 0.89
BRF1-216ENST00000550208 ELOAQ14241 798 aaKnown RBP20.59■□□□□ 0.89
BRF1-216ENST00000550208 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.59■□□□□ 0.89
BRF1-216ENST00000550208 PAGE3Q5JUK9 113 aa20.59■□□□□ 0.89
BRF1-216ENST00000550208 TIGD3Q6B0B8 471 aa20.59■□□□□ 0.89
BRF1-216ENST00000550208 ANGPTL8Q6UXH0 198 aa20.59■□□□□ 0.89
BRF1-216ENST00000550208 BNC2Q6ZN30 1099 aaPredicted RBP20.59■□□□□ 0.89
BRF1-216ENST00000550208 RNF130Q86XS8 419 aa20.59■□□□□ 0.89
BRF1-216ENST00000550208 OR4C3Q8NH37 302 aa20.59■□□□□ 0.89
BRF1-216ENST00000550208 ZFP90Q8TF47 636 aa20.59■□□□□ 0.89
BRF1-216ENST00000550208 XAGE5Q8WWM1 108 aa20.59■□□□□ 0.89
BRF1-216ENST00000550208 RAB8BQ92930 207 aa20.59■□□□□ 0.89
BRF1-216ENST00000550208 ELAC2Q9BQ52 826 aaKnown RBP20.59■□□□□ 0.89
BRF1-216ENST00000550208 RTN4RQ9BZR6 473 aa20.59■□□□□ 0.89
BRF1-216ENST00000550208 PAIP1Q9H074 479 aaKnown RBP20.59■□□□□ 0.89
BRF1-216ENST00000550208 ZDHHC11Q9H8X9 412 aa20.59■□□□□ 0.89
BRF1-216ENST00000550208 FAM53CQ9NYF3 392 aa20.59■□□□□ 0.89
BRF1-216ENST00000550208 HRH3Q9Y5N1 445 aa20.59■□□□□ 0.89
BRF1-216ENST00000550208 GMNCA6NCL1 334 aa20.58■□□□□ 0.89
BRF1-216ENST00000550208 C17orf51A8MQB3 221 aa20.58■□□□□ 0.89
BRF1-216ENST00000550208 ADAM10O14672 748 aa20.58■□□□□ 0.89
BRF1-216ENST00000550208 SCO2O43819 266 aa20.58■□□□□ 0.89
BRF1-216ENST00000550208 CDC40O60508 579 aaKnown RBP eCLIP20.58■□□□□ 0.89
BRF1-216ENST00000550208 DRD4P21917 467 aa20.58■□□□□ 0.89
BRF1-216ENST00000550208 SLC10A1Q14973 349 aa20.58■□□□□ 0.89
BRF1-216ENST00000550208 DCST2Q5T1A1 773 aa20.58■□□□□ 0.89
BRF1-216ENST00000550208 APOOLQ6UXV4 268 aa20.58■□□□□ 0.89
BRF1-216ENST00000550208 MARCH3Q86UD3 253 aa20.58■□□□□ 0.89
BRF1-216ENST00000550208 FAM109AQ8N4B1 249 aa20.58■□□□□ 0.89
BRF1-216ENST00000550208 WDSUB1Q8N9V3 476 aa20.58■□□□□ 0.89
BRF1-216ENST00000550208 OR1J4Q8NGS1 313 aa20.58■□□□□ 0.89
BRF1-216ENST00000550208 PNPT1Q8TCS8 783 aaKnown RBP20.58■□□□□ 0.89
BRF1-216ENST00000550208 SDF2Q99470 211 aa20.58■□□□□ 0.89
BRF1-216ENST00000550208 G6PC3Q9BUM1 346 aa20.58■□□□□ 0.89
BRF1-216ENST00000550208 SAR1AQ9NR31 198 aa20.58■□□□□ 0.89
BRF1-216ENST00000550208 SLAMF8Q9P0V8 285 aa20.58■□□□□ 0.89
BRF1-216ENST00000550208 PCDHB14Q9Y5E9 798 aa20.58■□□□□ 0.89
BRF1-216ENST00000550208 A0A096LPI6 279 aa20.57■□□□□ 0.88
BRF1-216ENST00000550208 A0A1W2PP18 115 aa20.57■□□□□ 0.88
BRF1-216ENST00000550208 SNPHO15079 494 aa20.57■□□□□ 0.88
BRF1-216ENST00000550208 KRT75O95678 551 aa20.57■□□□□ 0.88
BRF1-216ENST00000550208 UBAP2LQ14157 1087 aaKnown RBP20.57■□□□□ 0.88
BRF1-216ENST00000550208 COX20Q5RI15 118 aa20.57■□□□□ 0.88
BRF1-216ENST00000550208 OR5M10Q6IEU7 315 aa20.57■□□□□ 0.88
BRF1-216ENST00000550208 OLIG3Q7RTU3 272 aa20.57■□□□□ 0.88
BRF1-216ENST00000550208 RP1L1Q8IWN7 2480 aaPredicted RBP20.57■□□□□ 0.88
BRF1-216ENST00000550208 PRR7Q8TB68 274 aa20.57■□□□□ 0.88
BRF1-216ENST00000550208 AURKBQ96GD4 344 aaPredicted RBP20.57■□□□□ 0.88
BRF1-216ENST00000550208 FAM107BQ9H098 131 aa20.57■□□□□ 0.88
BRF1-216ENST00000550208 ZNF703Q9H7S9 590 aaPredicted RBP20.57■□□□□ 0.88
BRF1-216ENST00000550208 TPT1P8Q9HAU6 139 aa20.57■□□□□ 0.88
BRF1-216ENST00000550208 WIF1Q9Y5W5 379 aa20.57■□□□□ 0.88
BRF1-216ENST00000550208 LIPGQ9Y5X9 500 aa20.57■□□□□ 0.88
BRF1-216ENST00000550208 ESPL1Q14674 2120 aa20.57■□□□□ 0.88
BRF1-216ENST00000550208 NCKAP5O14513 1909 aa20.57■□□□□ 0.88
BRF1-216ENST00000550208 TBXA2RP21731 343 aa20.56■□□□□ 0.88
BRF1-216ENST00000550208 GDF1P27539 372 aa20.56■□□□□ 0.88
BRF1-216ENST00000550208 LCN1P31025 176 aa20.56■□□□□ 0.88
BRF1-216ENST00000550208 KHKP50053 298 aa20.56■□□□□ 0.88
BRF1-216ENST00000550208 ARHGAP11BQ3KRB8 267 aa20.56■□□□□ 0.88
BRF1-216ENST00000550208 HEPHL1Q6MZM0 1159 aa20.56■□□□□ 0.88
BRF1-216ENST00000550208 FGD2Q7Z6J4 655 aa20.56■□□□□ 0.88
BRF1-216ENST00000550208 CHERPQ8IWX8 916 aaKnown RBP20.56■□□□□ 0.88
BRF1-216ENST00000550208 GHDCQ8N2G8 530 aa20.56■□□□□ 0.88
BRF1-216ENST00000550208 CHDHQ8NE62 594 aaPredicted RBP20.56■□□□□ 0.88
BRF1-216ENST00000550208 DUSP19Q8WTR2 217 aa20.56■□□□□ 0.88
BRF1-216ENST00000550208 EXD2Q9NVH0 621 aa20.56■□□□□ 0.88
BRF1-216ENST00000550208 ABCG2Q9UNQ0 655 aa20.56■□□□□ 0.88
BRF1-216ENST00000550208 OSGIN2Q9Y236 505 aa20.56■□□□□ 0.88
BRF1-216ENST00000550208 C15orf41Q9Y2V0 281 aa20.56■□□□□ 0.88
BRF1-216ENST00000550208 NPIPA5A0A0B4J1W7 369 aa20.55■□□□□ 0.88
BRF1-216ENST00000550208 A0A1B0GTH9 108 aa20.55■□□□□ 0.88
BRF1-216ENST00000550208 PRAMEF27A3QJZ7 478 aa20.55■□□□□ 0.88
BRF1-216ENST00000550208 NPIPA7E9PJI5 369 aa20.55■□□□□ 0.88
BRF1-216ENST00000550208 HMGN4O00479 90 aa20.55■□□□□ 0.88
BRF1-216ENST00000550208 TRAPPC6AO75865 159 aa20.55■□□□□ 0.88
BRF1-216ENST00000550208 OXSR1O95747 527 aaPredicted RBP20.55■□□□□ 0.88
BRF1-216ENST00000550208 SNRPB2P08579 225 aaKnown RBP20.55■□□□□ 0.88
BRF1-216ENST00000550208 NPIPA8P0DM63 369 aa20.55■□□□□ 0.88
BRF1-216ENST00000550208 HOXB9P17482 250 aaPredicted RBP20.55■□□□□ 0.88
BRF1-216ENST00000550208 ATP6V1C1P21283 382 aa20.55■□□□□ 0.88
BRF1-216ENST00000550208 CLK3P49761 638 aaKnown RBP20.55■□□□□ 0.88
BRF1-216ENST00000550208 MVDP53602 400 aa20.55■□□□□ 0.88
BRF1-216ENST00000550208 KCNC4Q03721 635 aa20.55■□□□□ 0.88
BRF1-216ENST00000550208 KLF10Q13118 480 aa20.55■□□□□ 0.88
BRF1-216ENST00000550208 LRIF1Q5T3J3 769 aa20.55■□□□□ 0.88
BRF1-216ENST00000550208 SPATA21Q7Z572 469 aa20.55■□□□□ 0.88
BRF1-216ENST00000550208 CPLX4Q7Z7G2 160 aa20.55■□□□□ 0.88
BRF1-216ENST00000550208 PLCZ1Q86YW0 608 aa20.55■□□□□ 0.88
BRF1-216ENST00000550208 TBL1XR1Q9BZK7 514 aa20.55■□□□□ 0.88
BRF1-216ENST00000550208 UBQLN3Q9H347 655 aa20.55■□□□□ 0.88
BRF1-216ENST00000550208 SDHAF3Q9NRP4 125 aa20.55■□□□□ 0.88
BRF1-216ENST00000550208 UBQLN4Q9NRR5 601 aa20.55■□□□□ 0.88
BRF1-216ENST00000550208 PLSCR2Q9NRY7 297 aa20.55■□□□□ 0.88
BRF1-216ENST00000550208 QPCTLQ9NXS2 382 aa20.55■□□□□ 0.88
BRF1-216ENST00000550208 SLC25A37Q9NYZ2 338 aa20.55■□□□□ 0.88
BRF1-216ENST00000550208 B4GALT7Q9UBV7 327 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms