RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 OGFOD2Q6N063 350 aa15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 YRDCQ86U90 279 aaKnown RBP15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 IFNEQ86WN2 208 aa15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 COX18Q8N8Q8 333 aa15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 SLC16A11Q8NCK7 471 aa15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 OR4K17Q8NGC6 315 aa15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 MOAP1Q96BY2 351 aa15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 TTYH2Q9BSA4 534 aa15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 DPY30Q9C005 99 aa15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 ALKBH4Q9NXW9 302 aa15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 TAS2R10Q9NYW0 307 aa15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 FLRT3Q9NZU0 649 aa15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 MARCOQ9UEW3 520 aaPredicted RBP15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 FBXL2Q9UKC9 423 aa15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 RNF6Q9Y252 685 aa15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 INTS1Q8N201 2190 aaKnown RBP15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 NBPF19A0A087WUL8 3843 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 LRBAP50851 2863 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 SLCO1B7G3V0H7 640 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 CFLARO15519 480 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 HNRNPRO43390 633 aaKnown RBP15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 FADS1O60427 444 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 ACTL6AO96019 429 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 HMGN2P05204 90 aaKnown RBP15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 KRT16P08779 473 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 GLI4P10075 376 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 SRD5A2P31213 254 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 SOAT1P35610 550 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 CLNS1AP54105 237 aaKnown RBP15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 OCRLQ01968 901 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 STX5Q13190 355 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 LASP1Q14847 261 aaKnown RBP15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 ACSF3Q4G176 576 aaPredicted RBP15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 VASNQ6EMK4 673 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 OR5M10Q6IEU7 315 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 NUDT8Q8WV74 236 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 ABTB1Q969K4 478 aaPredicted RBP15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 ARL8AQ96BM9 186 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 CHMP6Q96FZ7 201 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 ATP6V1G3Q96LB4 118 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 TIMP4Q99727 224 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 UGT2B28Q9BY64 529 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 TBL1XR1Q9BZK7 514 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 PRDM14Q9GZV8 571 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 CXorf36Q9H7Y0 433 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 MANSC1Q9H8J5 431 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 SDHAF3Q9NRP4 125 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 DUSP22Q9NRW4 184 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 FAF1Q9UNN5 650 aaPredicted RBP15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 CAMK2AQ9UQM7 478 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 PCNX3Q9H6A9 2034 aa15.68■□□□□ 0.1
CHMP1A-208ENST00000550102 KIAA1549Q9HCM3 1950 aa15.67■□□□□ 0.1
CHMP1A-208ENST00000550102 DCHS2Q6V1P9 2916 aa15.67■□□□□ 0.1
CHMP1A-208ENST00000550102 APCP25054 2843 aa15.67■□□□□ 0.1
CHMP1A-208ENST00000550102 SDHDO14521 159 aa15.67■□□□□ 0.1
CHMP1A-208ENST00000550102 IGKV1D-16P01601 117 aa15.67■□□□□ 0.1
CHMP1A-208ENST00000550102 BMP7P18075 431 aa15.67■□□□□ 0.1
CHMP1A-208ENST00000550102 KIR3DL1P43629 444 aa15.67■□□□□ 0.1
CHMP1A-208ENST00000550102 CCT3P49368 545 aaKnown RBP15.67■□□□□ 0.1
CHMP1A-208ENST00000550102 SF3B4Q15427 424 aaKnown RBP eCLIP15.67■□□□□ 0.11e-6■■■□□ 15.3
CHMP1A-208ENST00000550102 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.67■□□□□ 0.1
CHMP1A-208ENST00000550102 DPY19L1Q2PZI1 675 aa15.67■□□□□ 0.1
CHMP1A-208ENST00000550102 GRAMD1BQ3KR37 738 aa15.67■□□□□ 0.1
CHMP1A-208ENST00000550102 EXOSC6Q5RKV6 272 aaKnown RBP15.67■□□□□ 0.1
CHMP1A-208ENST00000550102 DCST1Q5T197 706 aa15.67■□□□□ 0.1
CHMP1A-208ENST00000550102 SP5Q6BEB4 398 aaPredicted RBP15.67■□□□□ 0.1
CHMP1A-208ENST00000550102 CCDC71Q8IV32 467 aaPredicted RBP15.67■□□□□ 0.1
CHMP1A-208ENST00000550102 OR8J2Q8NGG1 315 aa15.67■□□□□ 0.1
CHMP1A-208ENST00000550102 OR10Q1Q8NGQ4 319 aa15.67■□□□□ 0.1
CHMP1A-208ENST00000550102 MARVELD3Q96A59 401 aa15.67■□□□□ 0.1
CHMP1A-208ENST00000550102 TESCQ96BS2 214 aa15.67■□□□□ 0.1
CHMP1A-208ENST00000550102 OTUB1Q96FW1 271 aaPredicted RBP15.67■□□□□ 0.1
CHMP1A-208ENST00000550102 C16orf58Q96GQ5 468 aa15.67■□□□□ 0.1
CHMP1A-208ENST00000550102 STACQ99469 402 aa15.67■□□□□ 0.1
CHMP1A-208ENST00000550102 YIPF4Q9BSR8 244 aa15.67■□□□□ 0.1
CHMP1A-208ENST00000550102 FAM90A27PA6NNH2 459 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 AHRRA9YTQ3 701 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 RNASET2O00584 256 aaKnown RBP15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 KLF11O14901 512 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 KCNK2O95069 426 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 NGFRP08138 427 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 KITP10721 976 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 DPP4P27487 766 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 LCN1P31025 176 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 HBA1P69905 142 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 POU6F2P78424 691 aaPredicted RBP15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 GANABQ14697 944 aaKnown RBP15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 RIPPLY2Q5TAB7 128 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 OR4F3Q6IEY1 312 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 CDC73Q6P1J9 531 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 AAGABQ6PD74 315 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 BHLHB9Q6PI77 547 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 FIGNL1Q6PIW4 674 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 ENPP6Q6UWR7 440 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 HDXQ7Z353 690 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 GALNT10Q86SR1 603 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 LACC1Q8IV20 430 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 GOLGA6L1Q8N7Z2 621 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 FADS6Q8N9I5 356 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 OR2M3Q8NG83 312 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms