RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 CCT7Q99832 543 aa12.14□□□□□ -0.47
GCN1-206ENST00000549815 TRMOQ9BU70 441 aa12.14□□□□□ -0.47
GCN1-206ENST00000549815 RBM24Q9BX46 236 aaKnown RBP12.14□□□□□ -0.47
GCN1-206ENST00000549815 ANKZF1Q9H8Y5 726 aa12.14□□□□□ -0.47
GCN1-206ENST00000549815 FAM120CQ9NX05 1096 aaKnown RBP12.14□□□□□ -0.47
GCN1-206ENST00000549815 MED11Q9P086 117 aa12.14□□□□□ -0.47
GCN1-206ENST00000549815 NTMQ9P121 344 aa12.14□□□□□ -0.47
GCN1-206ENST00000549815 MID2Q9UJV3 735 aa12.14□□□□□ -0.47
GCN1-206ENST00000549815 NF1P21359 2839 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 IGLV3-32A0A0A0MS00 114 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 A8MXE2 369 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 PDPK1O15530 556 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 TRIM13O60858 407 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 FGF4P08620 206 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 PRPS2P11908 318 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 NEFHP12036 1026 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 PEPDP12955 493 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 HK1P19367 917 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 ALDH3A1P30838 453 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 GABRA3P34903 492 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 SUCLG1P53597 346 aaKnown RBP12.13□□□□□ -0.47
GCN1-206ENST00000549815 PRR5P85299 388 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 HSPB3Q12988 150 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 GANABQ14697 944 aaKnown RBP12.13□□□□□ -0.47
GCN1-206ENST00000549815 EXOSC6Q5RKV6 272 aaKnown RBP12.13□□□□□ -0.47
GCN1-206ENST00000549815 LUZP2Q86TE4 346 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 MARCH3Q86UD3 253 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 TRABD2AQ86V40 505 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 GRAMD2AQ8IUY3 354 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 GCNT2Q8N0V5 402 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 FAM110BQ8TC76 370 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 DUSP19Q8WTR2 217 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 PIK3R3Q92569 461 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 C1GALT1C1Q96EU7 318 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 RMND5BQ96G75 393 aaPredicted RBP12.13□□□□□ -0.47
GCN1-206ENST00000549815 APOPT1Q96IL0 206 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 TMUB1Q9BVT8 246 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 ACBD3Q9H3P7 528 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 PIGMQ9H3S5 423 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 REEP4Q9H6H4 257 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 SDHAF3Q9NRP4 125 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 GALNT8Q9NY28 637 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 MRTO4Q9UKD2 239 aaKnown RBP12.13□□□□□ -0.47
GCN1-206ENST00000549815 PLEKHA6Q9Y2H5 1048 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 ZNF337Q9Y3M9 751 aa12.13□□□□□ -0.47
GCN1-206ENST00000549815 A0A1W2PNV4 684 aa12.12□□□□□ -0.47
GCN1-206ENST00000549815 OR2M5A3KFT3 312 aa12.12□□□□□ -0.47
GCN1-206ENST00000549815 TMEM233B4DJY2 109 aa12.12□□□□□ -0.47
GCN1-206ENST00000549815 H0YC42 278 aa12.12□□□□□ -0.47
GCN1-206ENST00000549815 UTS2O95399 124 aa12.12□□□□□ -0.47
GCN1-206ENST00000549815 CHRNGP07510 517 aa12.12□□□□□ -0.47
GCN1-206ENST00000549815 NUDT17P0C025 328 aa12.12□□□□□ -0.47
GCN1-206ENST00000549815 LINC00032P0C843 101 aa12.12□□□□□ -0.47
GCN1-206ENST00000549815 PSMD4P55036 377 aaKnown RBP12.12□□□□□ -0.47
GCN1-206ENST00000549815 TPD52P55327 224 aaPredicted RBP12.12□□□□□ -0.47
GCN1-206ENST00000549815 RPL38P63173 70 aaKnown RBP12.12□□□□□ -0.47
GCN1-206ENST00000549815 STX5Q13190 355 aa12.12□□□□□ -0.47
GCN1-206ENST00000549815 ZNHIT3Q15649 155 aaPredicted RBP12.12□□□□□ -0.47
GCN1-206ENST00000549815 TMEM44Q2T9K0 475 aa12.12□□□□□ -0.47
GCN1-206ENST00000549815 GRAMD1BQ3KR37 738 aa12.12□□□□□ -0.47
GCN1-206ENST00000549815 GLYR1Q49A26 553 aaPredicted RBP12.12□□□□□ -0.47
GCN1-206ENST00000549815 PAMR1Q6UXH9 720 aa12.12□□□□□ -0.47
GCN1-206ENST00000549815 RIBC1Q8N443 379 aaPredicted RBP12.12□□□□□ -0.47
GCN1-206ENST00000549815 OR5M1Q8NGP8 315 aa12.12□□□□□ -0.47
GCN1-206ENST00000549815 FIG4Q92562 907 aa12.12□□□□□ -0.47
GCN1-206ENST00000549815 TSSK3Q96PN8 268 aa12.12□□□□□ -0.47
GCN1-206ENST00000549815 PLEKHF2Q9H8W4 249 aa12.12□□□□□ -0.47
GCN1-206ENST00000549815 C3orf14Q9HBI5 128 aa12.12□□□□□ -0.47
GCN1-206ENST00000549815 SLC17A7Q9P2U7 560 aa12.12□□□□□ -0.47
GCN1-206ENST00000549815 BAIAP2L1Q9UHR4 511 aa12.12□□□□□ -0.47
GCN1-206ENST00000549815 PACSIN3Q9UKS6 424 aa12.12□□□□□ -0.47
GCN1-206ENST00000549815 TMED5Q9Y3A6 229 aa12.12□□□□□ -0.47
GCN1-206ENST00000549815 FIS1Q9Y3D6 152 aa12.12□□□□□ -0.47
GCN1-206ENST00000549815 A0A1W2PPR1 153 aa12.11□□□□□ -0.47
GCN1-206ENST00000549815 LINC01387J3KSC0 135 aa12.11□□□□□ -0.47
GCN1-206ENST00000549815 AKAP10O43572 662 aa12.11□□□□□ -0.47
GCN1-206ENST00000549815 NPHS1O60500 1241 aa12.11□□□□□ -0.47
GCN1-206ENST00000549815 TNFRSF21O75509 655 aa12.11□□□□□ -0.47
GCN1-206ENST00000549815 GOSR1O95249 250 aa12.11□□□□□ -0.47
GCN1-206ENST00000549815 KCNH1O95259 989 aa12.11□□□□□ -0.47
GCN1-206ENST00000549815 ANGPTL1O95841 491 aa12.11□□□□□ -0.47
GCN1-206ENST00000549815 HRGP04196 525 aa12.11□□□□□ -0.47
GCN1-206ENST00000549815 CRHP06850 196 aa12.11□□□□□ -0.47
GCN1-206ENST00000549815 ACP2P11117 423 aa12.11□□□□□ -0.47
GCN1-206ENST00000549815 BCKDHAP12694 445 aa12.11□□□□□ -0.47
GCN1-206ENST00000549815 ARRB2P32121 409 aa12.11□□□□□ -0.47
GCN1-206ENST00000549815 EEF1A1P68104 462 aaKnown RBP12.11□□□□□ -0.47
GCN1-206ENST00000549815 XKR7Q5GH72 579 aa12.11□□□□□ -0.47
GCN1-206ENST00000549815 ARL13AQ5H913 290 aaPredicted RBP12.11□□□□□ -0.47
GCN1-206ENST00000549815 EEF1A1P5Q5VTE0 462 aa12.11□□□□□ -0.47
GCN1-206ENST00000549815 RAET1LQ5VY80 246 aa12.11□□□□□ -0.47
GCN1-206ENST00000549815 VWA1Q6PCB0 445 aa12.11□□□□□ -0.47
GCN1-206ENST00000549815 ZAR1Q86SH2 424 aa12.11□□□□□ -0.47
GCN1-206ENST00000549815 UBQLNLQ8IYU4 475 aa12.11□□□□□ -0.47
GCN1-206ENST00000549815 MEIOBQ8N635 442 aa12.11□□□□□ -0.47
GCN1-206ENST00000549815 CDRT4Q8N9R6 151 aa12.11□□□□□ -0.47
GCN1-206ENST00000549815 NUP43Q8NFH3 380 aa12.11□□□□□ -0.47
GCN1-206ENST00000549815 GOT1L1Q8NHS2 421 aaPredicted RBP12.11□□□□□ -0.47
GCN1-206ENST00000549815 CLHC1Q8NHS4 586 aa12.11□□□□□ -0.47
GCN1-206ENST00000549815 TWIST2Q8WVJ9 160 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms