RNA–Protein interactions for RNA: ENST00000548598.5

RACGAP1-213, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-213ENST00000548598 LRRC46Q96FV0 321 aa15.32■□□□□ 0.04
RACGAP1-213ENST00000548598 TMEM109Q9BVC6 243 aa15.32■□□□□ 0.04
RACGAP1-213ENST00000548598 SFXN3Q9BWM7 321 aa15.32■□□□□ 0.04
RACGAP1-213ENST00000548598 EML4Q9HC35 981 aaKnown RBP15.32■□□□□ 0.04
RACGAP1-213ENST00000548598 CRIM1Q9NZV1 1036 aa15.32■□□□□ 0.04
RACGAP1-213ENST00000548598 MRTO4Q9UKD2 239 aaKnown RBP15.32■□□□□ 0.04
RACGAP1-213ENST00000548598 IGLV3-32A0A0A0MS00 114 aa15.31■□□□□ 0.04
RACGAP1-213ENST00000548598 ZWINTO95229 277 aa15.31■□□□□ 0.04
RACGAP1-213ENST00000548598 IGKV1D-16P01601 117 aa15.31■□□□□ 0.04
RACGAP1-213ENST00000548598 TMIGD3P0DMS9 266 aaPredicted RBP15.31■□□□□ 0.04
RACGAP1-213ENST00000548598 BCKDHAP12694 445 aa15.31■□□□□ 0.04
RACGAP1-213ENST00000548598 CREB1P16220 341 aa15.31■□□□□ 0.04
RACGAP1-213ENST00000548598 KIR2DL3P43628 341 aa15.31■□□□□ 0.04
RACGAP1-213ENST00000548598 STARP49675 285 aa15.31■□□□□ 0.04
RACGAP1-213ENST00000548598 SNTB1Q13884 538 aaKnown RBP15.31■□□□□ 0.04
RACGAP1-213ENST00000548598 MLC1Q15049 377 aa15.31■□□□□ 0.04
RACGAP1-213ENST00000548598 GALNTL6Q49A17 601 aa15.31■□□□□ 0.04
RACGAP1-213ENST00000548598 SPNS3Q6ZMD2 512 aa15.31■□□□□ 0.04
RACGAP1-213ENST00000548598 ZCCHC23Q6ZST2 131 aa15.31■□□□□ 0.04
RACGAP1-213ENST00000548598 DDIASQ8IXT1 998 aa15.31■□□□□ 0.04
RACGAP1-213ENST00000548598 ZZZ3Q8IYH5 903 aa15.31■□□□□ 0.04
RACGAP1-213ENST00000548598 CDRT4Q8N9R6 151 aa15.31■□□□□ 0.04
RACGAP1-213ENST00000548598 CLHC1Q8NHS4 586 aa15.31■□□□□ 0.04
RACGAP1-213ENST00000548598 MS4A4EQ96PG1 132 aa15.31■□□□□ 0.04
RACGAP1-213ENST00000548598 TM9SF2Q99805 663 aa15.31■□□□□ 0.04
RACGAP1-213ENST00000548598 DSN1Q9H410 356 aa15.31■□□□□ 0.04
RACGAP1-213ENST00000548598 C3orf14Q9HBI5 128 aa15.31■□□□□ 0.04
RACGAP1-213ENST00000548598 SDHAF3Q9NRP4 125 aa15.31■□□□□ 0.04
RACGAP1-213ENST00000548598 BAIAP2L1Q9UHR4 511 aa15.31■□□□□ 0.04
RACGAP1-213ENST00000548598 ATP6V1HQ9UI12 483 aa15.31■□□□□ 0.04
RACGAP1-213ENST00000548598 GXYLT2A0PJZ3 443 aa15.3■□□□□ 0.04
RACGAP1-213ENST00000548598 SCAMP2O15127 329 aaKnown RBP15.3■□□□□ 0.04
RACGAP1-213ENST00000548598 AKAP10O43572 662 aa15.3■□□□□ 0.04
RACGAP1-213ENST00000548598 KCNH1O95259 989 aa15.3■□□□□ 0.04
RACGAP1-213ENST00000548598 BPGMP07738 259 aa15.3■□□□□ 0.04
RACGAP1-213ENST00000548598 GABRA3P34903 492 aa15.3■□□□□ 0.04
RACGAP1-213ENST00000548598 GPC1P35052 558 aa15.3■□□□□ 0.04
RACGAP1-213ENST00000548598 DGKQP52824 942 aa15.3■□□□□ 0.04
RACGAP1-213ENST00000548598 PRR5P85299 388 aa15.3■□□□□ 0.04
RACGAP1-213ENST00000548598 SRYQ05066 204 aa15.3■□□□□ 0.04
RACGAP1-213ENST00000548598 FOXF2Q12947 444 aa15.3■□□□□ 0.04
RACGAP1-213ENST00000548598 VPS26BQ4G0F5 336 aa15.3■□□□□ 0.04
RACGAP1-213ENST00000548598 LRIG3Q6UXM1 1119 aa15.3■□□□□ 0.04
RACGAP1-213ENST00000548598 NUP43Q8NFH3 380 aa15.3■□□□□ 0.04
RACGAP1-213ENST00000548598 CEP70Q8NHQ1 597 aa15.3■□□□□ 0.04
RACGAP1-213ENST00000548598 FAM222BQ8WU58 562 aa15.3■□□□□ 0.04
RACGAP1-213ENST00000548598 PIK3R3Q92569 461 aa15.3■□□□□ 0.04
RACGAP1-213ENST00000548598 C1GALT1C1Q96EU7 318 aa15.3■□□□□ 0.04
RACGAP1-213ENST00000548598 PPP3R2Q96LZ3 170 aa15.3■□□□□ 0.04
RACGAP1-213ENST00000548598 ACBD3Q9H3P7 528 aa15.3■□□□□ 0.04
RACGAP1-213ENST00000548598 SIRT3Q9NTG7 399 aaPredicted RBP15.3■□□□□ 0.04
RACGAP1-213ENST00000548598 SH3BP4Q9P0V3 963 aa15.3■□□□□ 0.04
RACGAP1-213ENST00000548598 RPH3AQ9Y2J0 694 aaPredicted RBP15.3■□□□□ 0.04
RACGAP1-213ENST00000548598 AKAP6Q13023 2319 aa15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 MPDZO75970 2070 aa15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 TMEM114B3SHH9 223 aa15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 EEF1E1-BLOC1S5C9J1V9 151 aa15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 EEF1E1O43324 174 aaKnown RBP15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 SLU7O95391 586 aaKnown RBP15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 UTS2O95399 124 aa15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 NGFRP08138 427 aa15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 ACP2P11117 423 aa15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 PEPDP12955 493 aa15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 AGFG1P52594 562 aaKnown RBP15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 MANFP55145 182 aaKnown RBP15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 CLDN15P56746 228 aa15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 MFSD12Q6NUT3 480 aa15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 ZCCHC12Q6PEW1 402 aa15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 PLXDC2Q6UX71 529 aa15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 APOOLQ6UXV4 268 aa15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 R3HCC1LQ7Z5L2 792 aaKnown RBP15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 FAM110BQ8TC76 370 aa15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 RMND5BQ96G75 393 aaPredicted RBP15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 C3orf30Q96M34 536 aa15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 EQTNQ9NQ60 294 aa15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 RASSF1Q9NS23 344 aa15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 MED11Q9P086 117 aa15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 GIMAP2Q9UG22 337 aa15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 ZDHHC2Q9UIJ5 367 aa15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 ITGB1BP2Q9UKP3 347 aa15.29■□□□□ 0.04
RACGAP1-213ENST00000548598 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.28■□□□□ 0.04
RACGAP1-213ENST00000548598 A6NNC1 897 aa15.28■□□□□ 0.04
RACGAP1-213ENST00000548598 ALG1L2C9J202 215 aa15.28■□□□□ 0.04
RACGAP1-213ENST00000548598 LINC01387J3KSC0 135 aa15.28■□□□□ 0.04
RACGAP1-213ENST00000548598 EMC8O43402 210 aa15.28■□□□□ 0.04
RACGAP1-213ENST00000548598 TNFSF13O75888 250 aa15.28■□□□□ 0.04
RACGAP1-213ENST00000548598 ANGPTL1O95841 491 aa15.28■□□□□ 0.04
RACGAP1-213ENST00000548598 DDX5P17844 614 aaKnown RBP15.28■□□□□ 0.04
RACGAP1-213ENST00000548598 HK1P19367 917 aa15.28■□□□□ 0.04
RACGAP1-213ENST00000548598 MAPK1P28482 360 aa15.28■□□□□ 0.04
RACGAP1-213ENST00000548598 DNAJA1P31689 397 aaKnown RBP15.28■□□□□ 0.04
RACGAP1-213ENST00000548598 HPCAL1P37235 193 aa15.28■□□□□ 0.04
RACGAP1-213ENST00000548598 RPL3P39023 403 aaKnown RBP15.28■□□□□ 0.04
RACGAP1-213ENST00000548598 CLK3P49761 638 aaKnown RBP15.28■□□□□ 0.04
RACGAP1-213ENST00000548598 C17orf67Q0P5P2 114 aa15.28■□□□□ 0.04
RACGAP1-213ENST00000548598 STX5Q13190 355 aa15.28■□□□□ 0.04
RACGAP1-213ENST00000548598 DAZAP2Q15038 168 aaPredicted RBP15.28■□□□□ 0.04
RACGAP1-213ENST00000548598 TMEM44Q2T9K0 475 aa15.28■□□□□ 0.04
RACGAP1-213ENST00000548598 GRAMD1BQ3KR37 738 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms