RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 PEX16Q9Y5Y5 336 aa17.28■□□□□ 0.36
PRPF40B-208ENST00000548436 KNL1Q8NG31 2342 aa17.27■□□□□ 0.36
PRPF40B-208ENST00000548436 SHISA7A6NL88 538 aa17.27■□□□□ 0.36
PRPF40B-208ENST00000548436 CYR61O00622 381 aa17.27■□□□□ 0.36
PRPF40B-208ENST00000548436 PTNP21246 168 aa17.27■□□□□ 0.36
PRPF40B-208ENST00000548436 PSMA1P25786 263 aaKnown RBP17.27■□□□□ 0.36
PRPF40B-208ENST00000548436 CD97P48960 835 aa17.27■□□□□ 0.36
PRPF40B-208ENST00000548436 ZNF136P52737 540 aa17.27■□□□□ 0.36
PRPF40B-208ENST00000548436 DUSP8Q13202 625 aa17.27■□□□□ 0.36
PRPF40B-208ENST00000548436 C1DQ13901 141 aaKnown RBP17.27■□□□□ 0.36
PRPF40B-208ENST00000548436 KLHL22Q53GT1 634 aa17.27■□□□□ 0.36
PRPF40B-208ENST00000548436 EXOSC6Q5RKV6 272 aaKnown RBP17.27■□□□□ 0.36
PRPF40B-208ENST00000548436 STEAP3Q658P3 488 aa17.27■□□□□ 0.36
PRPF40B-208ENST00000548436 RNF44Q7L0R7 432 aa17.27■□□□□ 0.36
PRPF40B-208ENST00000548436 ANKK1Q8NFD2 765 aa17.27■□□□□ 0.36
PRPF40B-208ENST00000548436 OR4Q3Q8NH05 313 aa17.27■□□□□ 0.36
PRPF40B-208ENST00000548436 RSC1A1Q92681 617 aa17.27■□□□□ 0.36
PRPF40B-208ENST00000548436 NUAK2Q9H093 628 aa17.27■□□□□ 0.36
PRPF40B-208ENST00000548436 PIGUQ9H490 435 aa17.27■□□□□ 0.36
PRPF40B-208ENST00000548436 FBXO34Q9NWN3 711 aa17.27■□□□□ 0.36
PRPF40B-208ENST00000548436 STUB1Q9UNE7 303 aa17.27■□□□□ 0.36
PRPF40B-208ENST00000548436 ENTPD2Q9Y5L3 495 aa17.27■□□□□ 0.36
PRPF40B-208ENST00000548436 SAGE2PA6NJ88 616 aa17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 CTDSP2O14595 271 aa17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 ZSCAN9O15535 394 aaPredicted RBP17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 KLF4O43474 513 aa17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 HCRTR1O43613 425 aa17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 OR5F1O95221 314 aa17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 CH25HO95992 272 aa17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 ALOX5P09917 674 aa17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 FPR3P25089 353 aa17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 GTF2E2P29084 291 aaKnown RBP17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 RABIFP47224 123 aa17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 SHC2P98077 582 aa17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 SLC13A2Q13183 592 aa17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 LARS2Q15031 903 aaKnown RBP17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 ZNF181Q2M3W8 571 aa17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 C3orf38Q5JPI3 329 aa17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 SLC30A6Q6NXT4 461 aa17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 GDPGP1Q6ZNW5 385 aa17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 MBOAT2Q6ZWT7 520 aa17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 ZNF438Q7Z4V0 828 aa17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 POGLUT1Q8NBL1 392 aa17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 SMRP1Q8NCR6 262 aa17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 PIK3R3Q92569 461 aa17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 SLC38A2Q96QD8 506 aa17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 GAS2L1Q99501 681 aaPredicted RBP17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 BARHL1Q9BZE3 327 aa17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 ZNF350Q9GZX5 532 aa17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 STARD5Q9NSY2 213 aa17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 SLC7A7Q9UM01 511 aa17.27■□□□□ 0.35
PRPF40B-208ENST00000548436 A0A0J9YY10 115 aa17.26■□□□□ 0.35
PRPF40B-208ENST00000548436 KDM4EB2RXH2 506 aaPredicted RBP17.26■□□□□ 0.35
PRPF40B-208ENST00000548436 ATP1B1P05026 303 aa17.26■□□□□ 0.35
PRPF40B-208ENST00000548436 STAT5AP42229 794 aa17.26■□□□□ 0.35
PRPF40B-208ENST00000548436 RAB40BQ12829 278 aa17.26■□□□□ 0.35
PRPF40B-208ENST00000548436 EIF2B5Q13144 721 aaKnown RBP17.26■□□□□ 0.35
PRPF40B-208ENST00000548436 CCINQ13939 588 aa17.26■□□□□ 0.35
PRPF40B-208ENST00000548436 OR2G6Q5TZ20 316 aa17.26■□□□□ 0.35
PRPF40B-208ENST00000548436 SLC44A3Q8N4M1 653 aa17.26■□□□□ 0.35
PRPF40B-208ENST00000548436 FGF20Q9NP95 211 aaPredicted RBP17.26■□□□□ 0.35
PRPF40B-208ENST00000548436 IL20Q9NYY1 176 aa17.26■□□□□ 0.35
PRPF40B-208ENST00000548436 USP36Q9P275 1121 aaKnown RBP17.26■□□□□ 0.35
PRPF40B-208ENST00000548436 KCNE5Q9UJ90 142 aa17.26■□□□□ 0.35
PRPF40B-208ENST00000548436 HYKKA2RU49 373 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 ISPDA4D126 451 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 PRAMEF26H0Y7S4 382 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 PRG2P13727 222 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 NT5EP21589 574 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 ETV6P41212 452 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 MTNR1AP48039 350 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 SEPHS1P49903 392 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 RNF144AP50876 292 aaPredicted RBP17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 MINDY4Q4G0A6 757 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 DCST2Q5T1A1 773 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 SHFQ7M4L6 423 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 CCDC190Q86UF4 302 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 GALNT12Q8IXK2 581 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 CADM3Q8N126 398 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 GSDMCQ9BYG8 508 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 IL20RAQ9UHF4 553 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 UGT2A1Q9Y4X1 527 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 A0A087WV62 115 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 NPIPA5A0A0B4J1W7 369 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 FAM221BA6H8Z2 402 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 NPIPA7E9PJI5 369 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 ZNF670-ZNF695F2Z2N8 137 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 CDC42EP2O14613 210 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 SURF4O15260 269 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 GALR3O60755 368 aaPredicted RBP17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 GPR75O95800 540 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 THBS1P07996 1170 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 CT62P0C5K7 136 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 NPIPA8P0DM63 369 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 CPEP16870 476 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 MYL12AP19105 171 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 RPS4Y1P22090 263 aaKnown RBP17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 VSX2P58304 361 aaPredicted RBP17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 CD300CQ08708 224 aa17.25■□□□□ 0.35
PRPF40B-208ENST00000548436 MGAT2Q10469 447 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms