RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 FAIMQ9NVQ4 179 aa15.16■□□□□ 0.02
VPS29-204ENST00000548259 LIPT1Q9Y234 373 aa15.16■□□□□ 0.02
VPS29-204ENST00000548259 EXPH5Q8NEV8 1989 aa15.16■□□□□ 0.02
VPS29-204ENST00000548259 RAI1Q7Z5J4 1906 aaPredicted RBP15.15■□□□□ 0.02
VPS29-204ENST00000548259 KLHL2O95198 593 aa15.15■□□□□ 0.02
VPS29-204ENST00000548259 MPIP34949 423 aa15.15■□□□□ 0.02
VPS29-204ENST00000548259 ZNF155Q12901 538 aaPredicted RBP15.15■□□□□ 0.02
VPS29-204ENST00000548259 DECR1Q16698 335 aa15.15■□□□□ 0.02
VPS29-204ENST00000548259 OR5M1Q8NGP8 315 aa15.15■□□□□ 0.02
VPS29-204ENST00000548259 DUSP19Q8WTR2 217 aa15.15■□□□□ 0.02
VPS29-204ENST00000548259 KAT2AQ92830 837 aa15.15■□□□□ 0.02
VPS29-204ENST00000548259 SHCBP1LQ9BZQ2 653 aa15.15■□□□□ 0.02
VPS29-204ENST00000548259 FAM120CQ9NX05 1096 aaKnown RBP15.15■□□□□ 0.02
VPS29-204ENST00000548259 LPAR3Q9UBY5 353 aa15.15■□□□□ 0.02
VPS29-204ENST00000548259 CLEC4AQ9UMR7 237 aa15.15■□□□□ 0.02
VPS29-204ENST00000548259 A0A096LPK6 155 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 PLOD3O60568 738 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 SMIM24O75264 130 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 OTCP00480 354 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 TUBBP07437 444 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 RBP1P09455 135 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 PABPC4LP0CB38 370 aaKnown RBP15.14■□□□□ 0.01
VPS29-204ENST00000548259 IL32P24001 234 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 IRF9Q00978 393 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 DUSP2Q05923 314 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 C17orf67Q0P5P2 114 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 GALNT1Q10472 559 aaPredicted RBP15.14■□□□□ 0.01
VPS29-204ENST00000548259 HEPACAMQ14CZ8 416 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 ZNHIT3Q15649 155 aaPredicted RBP15.14■□□□□ 0.01
VPS29-204ENST00000548259 NRF1Q16656 503 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 SH2D4BQ5SQS7 431 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 PDSS1Q5T2R2 415 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 LGSNQ5TDP6 509 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 MROH9Q5TGP6 573 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 FAM180BQ6P0A1 224 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 NPSR1Q6W5P4 371 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 FAM9CQ8IZT9 166 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 OR9A2Q8NGT5 310 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 PHF21BQ96EK2 531 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 BEX2Q9BXY8 128 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 TBL1XR1Q9BZK7 514 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 Q9N2J8 555 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 VPS29Q9UBQ0 182 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 ABCA1O95477 2261 aa15.14■□□□□ 0.01
VPS29-204ENST00000548259 STX16-NPEPL1H3BU86 382 aa15.13■□□□□ 0.01
VPS29-204ENST00000548259 STX16O14662 325 aa15.13■□□□□ 0.01
VPS29-204ENST00000548259 FADS1O60427 444 aa15.13■□□□□ 0.01
VPS29-204ENST00000548259 ADAM11O75078 769 aa15.13■□□□□ 0.01
VPS29-204ENST00000548259 SOD3P08294 240 aa15.13■□□□□ 0.01
VPS29-204ENST00000548259 DANCRP0C864 163 aa15.13■□□□□ 0.01
VPS29-204ENST00000548259 ZNF17P17021 662 aa15.13■□□□□ 0.01
VPS29-204ENST00000548259 ME2P23368 584 aa15.13■□□□□ 0.01
VPS29-204ENST00000548259 TYK2P29597 1187 aa15.13■□□□□ 0.01
VPS29-204ENST00000548259 CDKN1AP38936 164 aa15.13■□□□□ 0.01
VPS29-204ENST00000548259 CTU2Q2VPK5 515 aaKnown RBP15.13■□□□□ 0.01
VPS29-204ENST00000548259 CREG2Q8IUH2 290 aa15.13■□□□□ 0.01
VPS29-204ENST00000548259 C1orf52Q8N6N3 182 aaKnown RBP15.13■□□□□ 0.01
VPS29-204ENST00000548259 OR4F6Q8NGB9 312 aa15.13■□□□□ 0.01
VPS29-204ENST00000548259 OR10D3Q8NH80 312 aa15.13■□□□□ 0.01
VPS29-204ENST00000548259 RAB3IL1Q8TBN0 382 aa15.13■□□□□ 0.01
VPS29-204ENST00000548259 FBF1Q8TES7 1133 aa15.13■□□□□ 0.01
VPS29-204ENST00000548259 HSD17B8Q92506 261 aa15.13■□□□□ 0.01
VPS29-204ENST00000548259 EXOSC8Q96B26 276 aaKnown RBP15.13■□□□□ 0.01
VPS29-204ENST00000548259 REXO5Q96IC2 774 aaKnown RBP15.13■□□□□ 0.01
VPS29-204ENST00000548259 KCNK17Q96T54 332 aa15.13■□□□□ 0.01
VPS29-204ENST00000548259 ANKRA2Q9H9E1 313 aa15.13■□□□□ 0.01
VPS29-204ENST00000548259 MCM8Q9UJA3 840 aa15.13■□□□□ 0.01
VPS29-204ENST00000548259 PCTPQ9UKL6 214 aa15.13■□□□□ 0.01
VPS29-204ENST00000548259 MAGED1Q9Y5V3 778 aaPredicted RBP15.13■□□□□ 0.01
VPS29-204ENST00000548259 A0A087WZY1 265 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 GNG14A0A1W2PPG7 69 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 B4DXG7 233 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 SLITRK5O94991 958 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 PDYNP01213 254 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 HSD3B1P14060 373 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 HSD3B2P26439 372 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 SLC6A8P48029 635 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 SERPINB8P50452 374 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 DSCR9P59020 149 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 FAPQ12884 760 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 TRAF3Q13114 568 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 ZNF672Q499Z4 452 aaPredicted RBP15.12■□□□□ 0.01
VPS29-204ENST00000548259 TMEM201Q5SNT2 666 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 NCMAPQ5T1S8 102 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 C6orf52Q5T4I8 152 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 DNAJC14Q6Y2X3 702 aaPredicted RBP15.12■□□□□ 0.01
VPS29-204ENST00000548259 GGNQ86UU5 652 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 CCDC25Q86WR0 208 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 OR4N2Q8NGD1 307 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 S100PBPQ96BU1 408 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 BBS4Q96RK4 519 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 ERP44Q9BS26 406 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 DPH5Q9H2P9 285 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 C3orf14Q9HBI5 128 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 SLC35C2Q9NQQ7 365 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 XPR1Q9UBH6 696 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 RNF14Q9UBS8 474 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 SAR1BQ9Y6B6 198 aa15.12■□□□□ 0.01
VPS29-204ENST00000548259 FAM187AA6NFU0 413 aa15.11■□□□□ 0.01
VPS29-204ENST00000548259 C17orf51A8MQB3 221 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms