RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 GANABQ14697 944 aaKnown RBP16.9■□□□□ 0.3
CHMP1A-203ENST00000547614 MLC1Q15049 377 aa16.9■□□□□ 0.3
CHMP1A-203ENST00000547614 ZCCHC12Q6PEW1 402 aa16.9■□□□□ 0.3
CHMP1A-203ENST00000547614 CDH24Q86UP0 819 aa16.9■□□□□ 0.3
CHMP1A-203ENST00000547614 C9orf106Q8NAJ2 232 aa16.9■□□□□ 0.3
CHMP1A-203ENST00000547614 NUP43Q8NFH3 380 aa16.9■□□□□ 0.3
CHMP1A-203ENST00000547614 OR2M3Q8NG83 312 aa16.9■□□□□ 0.3
CHMP1A-203ENST00000547614 CLHC1Q8NHS4 586 aa16.9■□□□□ 0.3
CHMP1A-203ENST00000547614 GPR151Q8TDV0 419 aa16.9■□□□□ 0.3
CHMP1A-203ENST00000547614 G6PC3Q9BUM1 346 aa16.9■□□□□ 0.3
CHMP1A-203ENST00000547614 PTGES2Q9H7Z7 377 aa16.9■□□□□ 0.3
CHMP1A-203ENST00000547614 HHATLQ9HCP6 504 aa16.9■□□□□ 0.3
CHMP1A-203ENST00000547614 EQTNQ9NQ60 294 aa16.9■□□□□ 0.3
CHMP1A-203ENST00000547614 KIAA1549Q9HCM3 1950 aa16.89■□□□□ 0.3
CHMP1A-203ENST00000547614 ANKRD17O75179 2603 aaKnown RBP16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 LINC01387J3KSC0 135 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 EMC8O43402 210 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 PEX11AO75192 247 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 RCBTB2O95199 551 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 ZWINTO95229 277 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 TMIGD3P0DMS9 266 aaPredicted RBP16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 PEPDP12955 493 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 ARRB2P32121 409 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 HPCAL1P37235 193 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 DGKQP52824 942 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 CLDN18P56856 261 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 B3GALT5-AS1P59052 145 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 EEF1A1P68104 462 aaKnown RBP16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 PRR5P85299 388 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 C17orf67Q0P5P2 114 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 ATP6AP1LQ52LC2 224 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 C6orf136Q5SQH8 315 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 EEF1A1P5Q5VTE0 462 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 KIF18BQ86Y91 864 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 NATD1Q8N6N6 113 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 GOT1L1Q8NHS2 421 aaPredicted RBP16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 AGR3Q8TD06 166 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 DUSP19Q8WTR2 217 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 GIMAP5Q96F15 307 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 MS4A4EQ96PG1 132 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 PARD6BQ9BYG5 372 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 ACBD3Q9H3P7 528 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 FLRT3Q9NZU0 649 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 JKAMPQ9P055 326 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 CLCF1Q9UBD9 225 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 ZDHHC2Q9UIJ5 367 aa16.89■□□□□ 0.29
CHMP1A-203ENST00000547614 IGLV3-32A0A0A0MS00 114 aa16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 GXYLT2A0PJZ3 443 aa16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 CLCA1A8K7I4 914 aa16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 C17orf51A8MQB3 221 aa16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 SCAMP2O15127 329 aaKnown RBP16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 CTIFO43310 598 aaKnown RBP16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 LYPLA1O75608 230 aaPredicted RBP16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 UTS2O95399 124 aa16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 NGFRP08138 427 aa16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 PRKAG1P54619 331 aa16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 KRT71Q3SY84 523 aa16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 GLYR1Q49A26 553 aaPredicted RBP16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 MARCH3Q86UD3 253 aa16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 NUDCD3Q8IVD9 361 aa16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 FAM222BQ8WU58 562 aa16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 PIK3R3Q92569 461 aa16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 RMND5BQ96G75 393 aaPredicted RBP16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 C3orf30Q96M34 536 aa16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 SFXN3Q9BWM7 321 aa16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 TBL1XR1Q9BZK7 514 aa16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 RTN4RQ9BZR6 473 aa16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 SSU72Q9NP77 194 aaKnown RBP16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 MED11Q9P086 117 aa16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 RPH3AQ9Y2J0 694 aaPredicted RBP16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 V9GYY5 206 aaPredicted RBP16.88■□□□□ 0.29
CHMP1A-203ENST00000547614 HCRTR2O43614 444 aa16.87■□□□□ 0.29
CHMP1A-203ENST00000547614 CTAG2O75638 210 aa16.87■□□□□ 0.29
CHMP1A-203ENST00000547614 IGKV1D-16P01601 117 aa16.87■□□□□ 0.29
CHMP1A-203ENST00000547614 HK1P19367 917 aa16.87■□□□□ 0.29
CHMP1A-203ENST00000547614 LCN1P31025 176 aa16.87■□□□□ 0.29
CHMP1A-203ENST00000547614 RFX3P48380 749 aa16.87■□□□□ 0.29
CHMP1A-203ENST00000547614 SERPINB4P48594 390 aa16.87■□□□□ 0.29
CHMP1A-203ENST00000547614 ZNF844Q08AG5 666 aa16.87■□□□□ 0.29
CHMP1A-203ENST00000547614 STX5Q13190 355 aa16.87■□□□□ 0.29
CHMP1A-203ENST00000547614 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.87■□□□□ 0.29
CHMP1A-203ENST00000547614 FLYWCH1Q4VC44 716 aa16.87■□□□□ 0.29
CHMP1A-203ENST00000547614 MFSD12Q6NUT3 480 aa16.87■□□□□ 0.29
CHMP1A-203ENST00000547614 EXOC3L1Q86VI1 746 aa16.87■□□□□ 0.29
CHMP1A-203ENST00000547614 TMEM200AQ86VY9 491 aa16.87■□□□□ 0.29
CHMP1A-203ENST00000547614 ZZZ3Q8IYH5 903 aa16.87■□□□□ 0.29
CHMP1A-203ENST00000547614 SLC16A11Q8NCK7 471 aa16.87■□□□□ 0.29
CHMP1A-203ENST00000547614 FAM110BQ8TC76 370 aa16.87■□□□□ 0.29
CHMP1A-203ENST00000547614 SLC9A6Q92581 669 aa16.87■□□□□ 0.29
CHMP1A-203ENST00000547614 ZIM3Q96PE6 472 aa16.87■□□□□ 0.29
CHMP1A-203ENST00000547614 ATAD3AQ9NVI7 634 aa16.87■□□□□ 0.29
CHMP1A-203ENST00000547614 GIMAP2Q9UG22 337 aa16.87■□□□□ 0.29
CHMP1A-203ENST00000547614 ITGB1BP2Q9UKP3 347 aa16.87■□□□□ 0.29
CHMP1A-203ENST00000547614 A0A1W2PRB8 838 aa16.86■□□□□ 0.29
CHMP1A-203ENST00000547614 FAM221AA4D161 298 aa16.86■□□□□ 0.29
CHMP1A-203ENST00000547614 ALG1L2C9J202 215 aa16.86■□□□□ 0.29
CHMP1A-203ENST00000547614 BIRC5O15392 142 aa16.86■□□□□ 0.29
CHMP1A-203ENST00000547614 RGS16O15492 202 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms