RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 DTNBP1Q96EV8 351 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 SDF2Q99470 211 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 OR51I1Q9H343 314 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 UBQLN3Q9H347 655 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 ZNF703Q9H7S9 590 aaPredicted RBP13.23□□□□□ -0.29
DDX54-203ENST00000546869 TPT1P8Q9HAU6 139 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 SAR1AQ9NR31 198 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 POLE3Q9NRF9 147 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 UBQLN4Q9NRR5 601 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 SLC6A13Q9NSD5 602 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 THUMPD1Q9NXG2 353 aaKnown RBP13.23□□□□□ -0.29
DDX54-203ENST00000546869 NPIPA1Q9UND3 350 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 NDUFAF1Q9Y375 327 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 MRPS18CQ9Y3D5 142 aaKnown RBP13.23□□□□□ -0.29
DDX54-203ENST00000546869 PCDHB14Q9Y5E9 798 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 WIF1Q9Y5W5 379 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 KCNE3Q9Y6H6 103 aa13.23□□□□□ -0.29
DDX54-203ENST00000546869 SHANK1Q9Y566 2161 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 IGLV3-32A0A0A0MS00 114 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 A0A1W2PQD3 144 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 HMGN4O00479 90 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 SUSD5O60279 629 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 HCN1O60741 890 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 WISP2O76076 250 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 ANP32DO95626 131 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 HPNP05981 417 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 GSNP06396 782 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 SNRPB2P08579 225 aaKnown RBP13.22□□□□□ -0.29
DDX54-203ENST00000546869 RFPL3SP0C7P2 107 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 DRD4P21917 467 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 RFC3P40938 356 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 MASP1P48740 699 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 KHKP50053 298 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 GYS2P54840 703 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 RPS26P62854 115 aaKnown RBP13.22□□□□□ -0.29
DDX54-203ENST00000546869 ELOAQ14241 798 aaKnown RBP13.22□□□□□ -0.29
DDX54-203ENST00000546869 COQ5Q5HYK3 327 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 PAGE3Q5JUK9 113 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 C6orf10Q5SRN2 563 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 ATAD3BQ5T9A4 648 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 FIGNL1Q6PIW4 674 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 SLC2A7Q6PXP3 512 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 SPATA21Q7Z572 469 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 RNF130Q86XS8 419 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 PLCZ1Q86YW0 608 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 OR5D16Q8NGK9 328 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 OR4C3Q8NH37 302 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 NMUR2Q9GZQ4 415 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 SAP130Q9H0E3 1048 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 NSRP1Q9H0G5 558 aaKnown RBP13.22□□□□□ -0.29
DDX54-203ENST00000546869 RAD21L1Q9H4I0 556 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 GALNT9Q9HCQ5 603 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 FBXO34Q9NWN3 711 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 LEF1Q9UJU2 399 aaPredicted RBP13.22□□□□□ -0.29
DDX54-203ENST00000546869 LIPT1Q9Y234 373 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 ZNF835Q9Y2P0 537 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 C15orf41Q9Y2V0 281 aa13.22□□□□□ -0.29
DDX54-203ENST00000546869 SPENQ96T58 3664 aaKnown RBP13.21□□□□□ -0.29
DDX54-203ENST00000546869 TRBV5-3A0A0A0MS03 114 aa13.21□□□□□ -0.29
DDX54-203ENST00000546869 NPIPB9F8W1W9 429 aa13.21□□□□□ -0.29
DDX54-203ENST00000546869 NR5A2O00482 541 aa13.21□□□□□ -0.29
DDX54-203ENST00000546869 SNX3O60493 162 aa13.21□□□□□ -0.29
DDX54-203ENST00000546869 CCDC22O60826 627 aa13.21□□□□□ -0.29
DDX54-203ENST00000546869 STX11O75558 287 aa13.21□□□□□ -0.29
DDX54-203ENST00000546869 UNC5CO95185 931 aa13.21□□□□□ -0.29
DDX54-203ENST00000546869 OR12D1P0DN82 309 aa13.21□□□□□ -0.29
DDX54-203ENST00000546869 CD1EP15812 388 aa13.21□□□□□ -0.29
DDX54-203ENST00000546869 ATP6V1C1P21283 382 aa13.21□□□□□ -0.29
DDX54-203ENST00000546869 PPIBP23284 216 aaKnown RBP13.21□□□□□ -0.29
DDX54-203ENST00000546869 MAGEA5P43359 124 aa13.21□□□□□ -0.29
DDX54-203ENST00000546869 GNGT1P63211 74 aa13.21□□□□□ -0.29
DDX54-203ENST00000546869 RBPJQ06330 500 aa13.21□□□□□ -0.29
DDX54-203ENST00000546869 C17orf67Q0P5P2 114 aa13.21□□□□□ -0.29
DDX54-203ENST00000546869 FADDQ13158 208 aa13.21□□□□□ -0.29
DDX54-203ENST00000546869 GRAMD1BQ3KR37 738 aa13.21□□□□□ -0.29
DDX54-203ENST00000546869 ARHGAP11AQ6P4F7 1023 aa13.21□□□□□ -0.29
DDX54-203ENST00000546869 ANGPTL8Q6UXH0 198 aa13.21□□□□□ -0.29
DDX54-203ENST00000546869 GFRALQ6UXV0 394 aa13.21□□□□□ -0.29
DDX54-203ENST00000546869 Q6ZPB1 254 aaPredicted RBP13.21□□□□□ -0.29
DDX54-203ENST00000546869 CPLX4Q7Z7G2 160 aa13.21□□□□□ -0.29
DDX54-203ENST00000546869 MISPQ8IVT2 679 aa13.21□□□□□ -0.29
DDX54-203ENST00000546869 CHERPQ8IWX8 916 aaKnown RBP13.21□□□□□ -0.29
DDX54-203ENST00000546869 XAGE5Q8WWM1 108 aa13.21□□□□□ -0.29
DDX54-203ENST00000546869 OTUB1Q96FW1 271 aaPredicted RBP13.21□□□□□ -0.29
DDX54-203ENST00000546869 GNRHR2Q96P88 292 aa13.21□□□□□ -0.29
DDX54-203ENST00000546869 TRNT1Q96Q11 434 aaKnown RBP13.21□□□□□ -0.29
DDX54-203ENST00000546869 ZNF350Q9GZX5 532 aa13.21□□□□□ -0.29
DDX54-203ENST00000546869 NUP214P35658 2090 aaPredicted RBP13.2□□□□□ -0.3
DDX54-203ENST00000546869 EXPH5Q8NEV8 1989 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 OR14I1A6ND48 311 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 FAM166BA8MTA8 275 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 CLIC1O00299 241 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 ANGPT2O15123 496 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 OXSR1O95747 527 aaPredicted RBP13.2□□□□□ -0.3
DDX54-203ENST00000546869 ANGPTL1O95841 491 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 NPPAP01160 153 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 STSP08842 583 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 BMP2P12643 396 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 ENDOUP21128 410 aaKnown RBP13.2□□□□□ -0.3
DDX54-203ENST00000546869 GNLYP22749 145 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms