RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 MKL2Q9ULH7 1088 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 SLC9A8Q9Y2E8 581 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 WBP11Q9Y2W2 641 aaKnown RBP11.11□□□□□ -0.63
CCDC38-202ENST00000546386 OR10H1Q9Y4A9 318 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 MPDZO75970 2070 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 FAM183AA6NL82 134 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 TLX2O43763 284 aaPredicted RBP11.11□□□□□ -0.63
CCDC38-202ENST00000546386 SLC2A10O95528 541 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 C7P10643 843 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 INAVAQ3KP66 663 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 FLYWCH1Q4VC44 716 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 ZC3H12BQ5HYM0 836 aaKnown RBP11.11□□□□□ -0.63
CCDC38-202ENST00000546386 ZNF770Q6IQ21 691 aaPredicted RBP11.11□□□□□ -0.63
CCDC38-202ENST00000546386 ACSM5Q6NUN0 579 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 SLC30A6Q6NXT4 461 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 PAQR6Q6TCH4 344 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 PTCHD4Q6ZW05 846 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 PLEKHM3Q6ZWE6 761 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 CADM2Q8N3J6 435 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 C16orf52Q8NHV5 167 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 NACC2Q96BF6 587 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 ZDHHC12Q96GR4 267 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 DUSP15Q9H1R2 295 aaPredicted RBP11.11□□□□□ -0.63
CCDC38-202ENST00000546386 RSL24D1Q9UHA3 163 aaKnown RBP11.11□□□□□ -0.63
CCDC38-202ENST00000546386 CLDN16Q9Y5I7 305 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 A0A1W2PQM1 296 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 ZC3H12DA2A288 527 aaKnown RBP11.1□□□□□ -0.63
CCDC38-202ENST00000546386 FAM221BA6H8Z2 402 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 TLCD2A6NGC4 264 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 C17orf105B2RV13 164 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 CDC42EP2O14613 210 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 SERPINI2O75830 405 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 PDE9AO76083 593 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 WISP1O95388 367 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 ALOX5P09917 674 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 RNH1P13489 461 aaKnown RBP11.1□□□□□ -0.63
CCDC38-202ENST00000546386 TSFMP43897 325 aaKnown RBP11.1□□□□□ -0.63
CCDC38-202ENST00000546386 LIMS1P48059 325 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 GABRA4P48169 554 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 ALDH3B2P48448 385 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 CCR4P51679 360 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 RAB38P57729 211 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 CCL7P80098 99 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 PLAURQ03405 335 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 NSDHLQ15738 373 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 FHL5Q5TD97 284 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 BROXQ5VW32 411 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 ZNF773Q6PK81 442 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 RRM2BQ7LG56 351 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 SH3YL1Q96HL8 342 aaPredicted RBP11.1□□□□□ -0.63
CCDC38-202ENST00000546386 DGAT2Q96PD7 388 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 OR6C1Q96RD1 312 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 APOL4Q9BPW4 351 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 C19orf53Q9UNZ5 99 aaPredicted RBP11.1□□□□□ -0.63
CCDC38-202ENST00000546386 PLCL2Q9UPR0 1127 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 ZNF443Q9Y2A4 671 aaPredicted RBP11.1□□□□□ -0.63
CCDC38-202ENST00000546386 CACNA1GO43497 2377 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 SH3PXD2BA1X283 911 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 ENTPD6O75354 484 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 KCNK2O95069 426 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 ATP1B1P05026 303 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 RPLP0P05388 317 aaKnown RBP11.1□□□□□ -0.63
CCDC38-202ENST00000546386 S1PR1P21453 382 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 HTR2AP28223 471 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 GP2P55259 537 aaKnown RBP11.1□□□□□ -0.63
CCDC38-202ENST00000546386 CEBPEQ15744 281 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 PHF19Q5T6S3 580 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 NPSR1Q6W5P4 371 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 PMEPA1Q969W9 287 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 HRASLS5Q96KN8 279 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 ITPAQ9BY32 194 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 FAM192AQ9GZU8 254 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 LYRM4Q9HD34 91 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 PCDHGA10Q9Y5H3 936 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 GMEB1Q9Y692 573 aa11.1□□□□□ -0.63
CCDC38-202ENST00000546386 A0A0G2JPF8 293 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 HNRNPCL2B2RXH8 293 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 HNRNPCL3B7ZW38 293 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 H3BMQ9 156 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 KHNYNO15037 678 aaKnown RBP11.09□□□□□ -0.63
CCDC38-202ENST00000546386 HNRNPCL4P0DMR1 293 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 GLB1P16278 677 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 GSTM2P28161 218 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 CRISP1P54107 249 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 VBP1P61758 197 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 HSD11B2P80365 405 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 PLK5Q496M5 336 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 TRIM61Q5EBN2 209 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 HSDL2Q6YN16 418 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 KIF18BQ86Y91 864 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 TMEM105Q8N8V8 129 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 B3GNT7Q8NFL0 401 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 HDAC2Q92769 488 aaKnown RBP11.09□□□□□ -0.63
CCDC38-202ENST00000546386 ZNF524Q96C55 264 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 C8orf44Q96CB5 159 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 COG8Q96MW5 612 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 TRNT1Q96Q11 434 aaKnown RBP11.09□□□□□ -0.63
CCDC38-202ENST00000546386 COPS4Q9BT78 406 aa11.09□□□□□ -0.63
CCDC38-202ENST00000546386 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.09□□□□□ -0.63
CCDC38-202ENST00000546386 DPH1Q9BZG8 443 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms