RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 TMEM204Q9BSN7 226 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 LMF2Q9BU23 707 aaKnown RBP11.28□□□□□ -0.6
COPS7A-221ENST00000546229 PINK1Q9BXM7 581 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 EBPLQ9BY08 206 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 ZNF395Q9H8N7 513 aaPredicted RBP11.28□□□□□ -0.6
COPS7A-221ENST00000546229 TNFRSF12AQ9NP84 129 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 FAM120CQ9NX05 1096 aaKnown RBP11.28□□□□□ -0.6
COPS7A-221ENST00000546229 ELOVL5Q9NYP7 299 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 MED11Q9P086 117 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 PPP4R1LQ9P1A2 415 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 USF3Q68DE3 2245 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 FAM171A2A8MVW0 826 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 SHISA8B8ZZ34 492 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 ARHGEF9O43307 516 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 IL33O95760 270 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 KRT6AP02538 564 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 KRT6BP04259 564 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 IFI6P09912 130 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 POU2F1P14859 743 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 HK1P19367 917 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 CASQ1P31415 396 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 KRT6CP48668 564 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 PTH2RP49190 550 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 ZNF155Q12901 538 aaPredicted RBP11.27□□□□□ -0.61
COPS7A-221ENST00000546229 HEPACAMQ14CZ8 416 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 PON3Q15166 354 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 CYP27C1Q4G0S4 372 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 EXOSC6Q5RKV6 272 aaKnown RBP11.27□□□□□ -0.61
COPS7A-221ENST00000546229 RAET1LQ5VY80 246 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 TMEM107Q6UX40 140 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 FAM214BQ7L5A3 538 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 UHMK1Q8TAS1 419 aaKnown RBP11.27□□□□□ -0.61
COPS7A-221ENST00000546229 CCL19Q99731 98 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 MED18Q9BUE0 208 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 GLIPR2Q9H4G4 154 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 UBTD1Q9HAC8 227 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 ZNF701Q9NV72 531 aaPredicted RBP11.27□□□□□ -0.61
COPS7A-221ENST00000546229 NMRK1Q9NWW6 199 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 ZNF226Q9NYT6 803 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 TAS2R9Q9NYW1 312 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 EMCNQ9ULC0 261 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 CCL27Q9Y4X3 112 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 TIMM22Q9Y584 194 aa11.27□□□□□ -0.61
COPS7A-221ENST00000546229 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.27□□□□□ -0.61
COPS7A-221ENST00000546229 CR1P17927 2039 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 SVEP1Q4LDE5 3571 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.26□□□□□ -0.61
COPS7A-221ENST00000546229 GNG14A0A1W2PPG7 69 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 NPIPB8E9PQR5 432 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 C16orf97H3BN30 126 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 CASKO14936 926 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 SEC14L5O43304 696 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 SS18L1O75177 396 aaPredicted RBP11.26□□□□□ -0.61
COPS7A-221ENST00000546229 COQ9O75208 318 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 ULK1O75385 1050 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 SUPT7LO94864 414 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 SLITRK5O94991 958 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 ESRRBO95718 433 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 JUNP05412 331 aaKnown RBP11.26□□□□□ -0.61
COPS7A-221ENST00000546229 ENO1P06733 434 aaKnown RBP11.26□□□□□ -0.61
COPS7A-221ENST00000546229 IMPDH1P20839 514 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 FPR1P21462 350 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 GSTM5P46439 218 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 PRKAA2P54646 552 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 ZNF844Q08AG5 666 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 ACSM2AQ08AH3 577 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 ZNF763Q0D2J5 394 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 LCP2Q13094 533 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 GLYR1Q49A26 553 aaPredicted RBP11.26□□□□□ -0.61
COPS7A-221ENST00000546229 ACSM2BQ68CK6 577 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 SEZ6L2Q6UXD5 910 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 STAC2Q6ZMT1 411 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 MARCH3Q86UD3 253 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 MEIOBQ8N635 442 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 METTL6Q8TCB7 284 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 PERPQ96FX8 193 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 AMDHD1Q96NU7 426 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 FAM111AQ96PZ2 611 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 FMO2Q99518 471 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 MYNNQ9NPC7 610 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 PFDN4Q9NQP4 134 aa11.26□□□□□ -0.61
COPS7A-221ENST00000546229 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.25□□□□□ -0.61
COPS7A-221ENST00000546229 GXYLT2A0PJZ3 443 aa11.25□□□□□ -0.61
COPS7A-221ENST00000546229 C7orf72A4D263 438 aa11.25□□□□□ -0.61
COPS7A-221ENST00000546229 INAFM1C9JVW0 142 aa11.25□□□□□ -0.61
COPS7A-221ENST00000546229 POC1B-GALNT4F8VUJ3 575 aa11.25□□□□□ -0.61
COPS7A-221ENST00000546229 H3BML4 177 aa11.25□□□□□ -0.61
COPS7A-221ENST00000546229 LINC01387J3KSC0 135 aa11.25□□□□□ -0.61
COPS7A-221ENST00000546229 PLAUP00749 431 aa11.25□□□□□ -0.61
COPS7A-221ENST00000546229 THBS1P07996 1170 aa11.25□□□□□ -0.61
COPS7A-221ENST00000546229 ABHD2P08910 425 aa11.25□□□□□ -0.61
COPS7A-221ENST00000546229 SNRPAP09012 282 aaKnown RBP11.25□□□□□ -0.61
COPS7A-221ENST00000546229 ANXA4P09525 319 aaPredicted RBP11.25□□□□□ -0.61
COPS7A-221ENST00000546229 ZNF17P17021 662 aa11.25□□□□□ -0.61
COPS7A-221ENST00000546229 IL11P20809 199 aa11.25□□□□□ -0.61
COPS7A-221ENST00000546229 ATP5F1P24539 256 aaPredicted RBP11.25□□□□□ -0.61
COPS7A-221ENST00000546229 MPIP34949 423 aa11.25□□□□□ -0.61
COPS7A-221ENST00000546229 KRT20P35900 424 aa11.25□□□□□ -0.61
COPS7A-221ENST00000546229 NCBP2P52298 156 aaKnown RBP eCLIP11.25□□□□□ -0.61
COPS7A-221ENST00000546229 PKNOX1P55347 436 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms