RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 RAB8BQ92930 207 aa18.75■□□□□ 0.59
HMGA2-211ENST00000545998 CCDC106Q9BWC9 280 aa18.75■□□□□ 0.59
HMGA2-211ENST00000545998 OSBPL11Q9BXB4 747 aa18.75■□□□□ 0.59
HMGA2-211ENST00000545998 MYLK2Q9H1R3 596 aa18.75■□□□□ 0.59
HMGA2-211ENST00000545998 GALNT9Q9HCQ5 603 aa18.75■□□□□ 0.59
HMGA2-211ENST00000545998 KLRF1Q9NZS2 232 aa18.75■□□□□ 0.59
HMGA2-211ENST00000545998 VAPAQ9P0L0 249 aa18.75■□□□□ 0.59
HMGA2-211ENST00000545998 ZGRF1Q86YA3 2104 aa18.74■□□□□ 0.59
HMGA2-211ENST00000545998 CLIC1O00299 241 aa18.74■□□□□ 0.59
HMGA2-211ENST00000545998 UNC5CO95185 931 aa18.74■□□□□ 0.59
HMGA2-211ENST00000545998 FAM107AO95990 144 aa18.74■□□□□ 0.59
HMGA2-211ENST00000545998 AK1P00568 194 aa18.74■□□□□ 0.59
HMGA2-211ENST00000545998 EVI2BP34910 448 aa18.74■□□□□ 0.59
HMGA2-211ENST00000545998 GAS1P54826 345 aa18.74■□□□□ 0.59
HMGA2-211ENST00000545998 ARHGAP11BQ3KRB8 267 aa18.74■□□□□ 0.59
HMGA2-211ENST00000545998 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.74■□□□□ 0.59
HMGA2-211ENST00000545998 SIAH3Q8IW03 269 aa18.74■□□□□ 0.59
HMGA2-211ENST00000545998 OR52N2Q8NGI0 321 aa18.74■□□□□ 0.59
HMGA2-211ENST00000545998 NR4A3Q92570 626 aa18.74■□□□□ 0.59
HMGA2-211ENST00000545998 MIB2Q96AX9 1013 aa18.74■□□□□ 0.59
HMGA2-211ENST00000545998 SDF2Q99470 211 aa18.74■□□□□ 0.59
HMGA2-211ENST00000545998 SLX1AQ9BQ83 275 aa18.74■□□□□ 0.59
HMGA2-211ENST00000545998 TTTY12Q9BZ98 90 aa18.74■□□□□ 0.59
HMGA2-211ENST00000545998 IL1RL2Q9HB29 575 aa18.74■□□□□ 0.59
HMGA2-211ENST00000545998 ZFP64Q9NPA5 681 aa18.74■□□□□ 0.59
HMGA2-211ENST00000545998 OLAHQ9NV23 265 aa18.74■□□□□ 0.59
HMGA2-211ENST00000545998 EXD2Q9NVH0 621 aa18.74■□□□□ 0.59
HMGA2-211ENST00000545998 ABCG2Q9UNQ0 655 aa18.74■□□□□ 0.59
HMGA2-211ENST00000545998 ARL2BPQ9Y2Y0 163 aa18.74■□□□□ 0.59
HMGA2-211ENST00000545998 GMEB1Q9Y692 573 aa18.74■□□□□ 0.59
HMGA2-211ENST00000545998 FREM3P0C091 2139 aa18.74■□□□□ 0.59
HMGA2-211ENST00000545998 ZNF407Q9C0G0 2248 aa18.74■□□□□ 0.59
HMGA2-211ENST00000545998 MYO18BQ8IUG5 2567 aa18.73■□□□□ 0.59
HMGA2-211ENST00000545998 LRRC3CA6NJW4 275 aa18.73■□□□□ 0.59
HMGA2-211ENST00000545998 ADAM10O14672 748 aa18.73■□□□□ 0.59
HMGA2-211ENST00000545998 ZNF24P17028 368 aa18.73■□□□□ 0.59
HMGA2-211ENST00000545998 MST1P26927 711 aa18.73■□□□□ 0.59
HMGA2-211ENST00000545998 ANXA11P50995 505 aaKnown RBP18.73■□□□□ 0.59
HMGA2-211ENST00000545998 FUT5Q11128 374 aa18.73■□□□□ 0.59
HMGA2-211ENST00000545998 HYAL4Q2M3T9 481 aa18.73■□□□□ 0.59
HMGA2-211ENST00000545998 GRAMD1BQ3KR37 738 aa18.73■□□□□ 0.59
HMGA2-211ENST00000545998 FNDC7Q5VTL7 733 aa18.73■□□□□ 0.59
HMGA2-211ENST00000545998 DHDDSQ86SQ9 333 aa18.73■□□□□ 0.59
HMGA2-211ENST00000545998 ZNF605Q86T29 641 aa18.73■□□□□ 0.59
HMGA2-211ENST00000545998 PACS2Q86VP3 889 aa18.73■□□□□ 0.59
HMGA2-211ENST00000545998 SNX32Q86XE0 403 aa18.73■□□□□ 0.59
HMGA2-211ENST00000545998 OR4C3Q8NH37 302 aa18.73■□□□□ 0.59
HMGA2-211ENST00000545998 TMEM41AQ96HV5 264 aa18.73■□□□□ 0.59
HMGA2-211ENST00000545998 BOKQ9UMX3 212 aaPredicted RBP18.73■□□□□ 0.59
HMGA2-211ENST00000545998 DNAJC13O75165 2243 aa18.73■□□□□ 0.59
HMGA2-211ENST00000545998 LOC100653049A0A140TA62 436 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 PRAMEF27A3QJZ7 478 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 BBIP1A8MTZ0 92 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 KRT34O76011 436 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 NGFRP08138 427 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 TDGF1P3P51864 188 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 ALDH6A1Q02252 535 aaKnown RBP18.72■□□□□ 0.59
HMGA2-211ENST00000545998 PLGLB1Q02325 96 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 CYLC2Q14093 348 aaPredicted RBP18.72■□□□□ 0.59
HMGA2-211ENST00000545998 COQ5Q5HYK3 327 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 ATAD3BQ5T9A4 648 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 C16orf62Q7Z3J2 963 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 ZNF597Q96LX8 424 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 WIF1Q9Y5W5 379 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 C2orf72A6NCS6 295 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 FAM166BA8MTA8 275 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 WISP2O76076 250 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 ETFAP13804 333 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 ATP6V1C1P21283 382 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 TBXA2RP21731 343 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 CRATP43155 626 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 PPIAP62937 165 aaKnown RBP18.72■□□□□ 0.59
HMGA2-211ENST00000545998 RGNQ15493 299 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 REP15Q6BDI9 236 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 APOOLQ6UXV4 268 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 SLC22A16Q86VW1 577 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 TREML1Q86YW5 311 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 RP9Q8TA86 221 aaKnown RBP18.72■□□□□ 0.59
HMGA2-211ENST00000545998 JSRP1Q96MG2 331 aaPredicted RBP18.72■□□□□ 0.59
HMGA2-211ENST00000545998 RTN4RQ9BZR6 473 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 ZNF350Q9GZX5 532 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 RAD21L1Q9H4I0 556 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 UBQLN4Q9NRR5 601 aa18.72■□□□□ 0.59
HMGA2-211ENST00000545998 PCNX3Q9H6A9 2034 aa18.71■□□□□ 0.59
HMGA2-211ENST00000545998 UBR5O95071 2799 aaPredicted RBP18.71■□□□□ 0.59
HMGA2-211ENST00000545998 HELZ2Q9BYK8 2649 aaKnown RBP18.71■□□□□ 0.59
HMGA2-211ENST00000545998 TFECO14948 347 aaPredicted RBP18.71■□□□□ 0.59
HMGA2-211ENST00000545998 STX11O75558 287 aa18.71■□□□□ 0.59
HMGA2-211ENST00000545998 ZIC2O95409 532 aaPredicted RBP18.71■□□□□ 0.59
HMGA2-211ENST00000545998 OXSR1O95747 527 aaPredicted RBP18.71■□□□□ 0.59
HMGA2-211ENST00000545998 GUSBP08236 651 aa18.71■□□□□ 0.59
HMGA2-211ENST00000545998 RFPL3SP0C7P2 107 aa18.71■□□□□ 0.59
HMGA2-211ENST00000545998 PPIBP23284 216 aaKnown RBP18.71■□□□□ 0.59
HMGA2-211ENST00000545998 NFYCQ13952 458 aa18.71■□□□□ 0.59
HMGA2-211ENST00000545998 FLYWCH1Q4VC44 716 aa18.71■□□□□ 0.59
HMGA2-211ENST00000545998 RUNDC3AQ59EK9 446 aa18.71■□□□□ 0.59
HMGA2-211ENST00000545998 AP1ARQ63HQ0 302 aa18.71■□□□□ 0.59
HMGA2-211ENST00000545998 TIGD3Q6B0B8 471 aa18.71■□□□□ 0.59
HMGA2-211ENST00000545998 TMEM251Q8N6I4 163 aa18.71■□□□□ 0.59
HMGA2-211ENST00000545998 ANKS4BQ8N8V4 417 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms