RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 MRPL48Q96GC5 212 aaKnown RBP6.07□□□□□ -1.44
SNHG1-225ENST00000545920 CCDC74BQ96LY2 380 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 FANCD2OSQ96PS1 177 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 NEDD4LQ96PU5 975 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 OR2M2Q96R28 347 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 ARHGDIGQ99819 225 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 TTYH2Q9BSA4 534 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 MRI1Q9BV20 369 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 SARGQ9BW04 601 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 MKRN2Q9H000 416 aaKnown RBP6.07□□□□□ -1.44
SNHG1-225ENST00000545920 OR51B5Q9H339 312 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 FBRSQ9HAH7 460 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 SPHK2Q9NRA0 654 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 CYSLTR2Q9NS75 346 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 GIMAP4Q9NUV9 329 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 IL20Q9NYY1 176 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 AKAP7Q9P0M2 348 aaPredicted RBP6.07□□□□□ -1.44
SNHG1-225ENST00000545920 CLEC2DQ9UHP7 191 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 FBXW2Q9UKT8 454 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 ACSL6Q9UKU0 697 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 ACSL5Q9ULC5 683 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 BAIAP2Q9UQB8 552 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 MRPS23Q9Y3D9 190 aaKnown RBP6.07□□□□□ -1.44
SNHG1-225ENST00000545920 NPFFR2Q9Y5X5 522 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 CDH10Q9Y6N8 788 aa6.07□□□□□ -1.44
SNHG1-225ENST00000545920 PLXNB3Q9ULL4 1909 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 TRAV20A0A0B4J274 112 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 ABHD14A-ACY1A0A1B0GW23 586 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 C7orf66A4D0T2 115 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 LINC00862A6NCI5 91 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 FAM86C2PA6NEL3 165 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 TMEM202A6NGA9 273 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 OR6C70A6NIJ9 312 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 A8MX80 341 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 INMT-MINDY4F8WBC2 141 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 DLL1O00548 723 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 SHOXO15266 292 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 NDUFS4O43181 175 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 FMO6PO60774 539 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 STX11O75558 287 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 OR2B3O76000 313 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 PAPLNO95428 1278 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 SERPINA3P01011 423 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 C1QCP02747 245 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 SERPIND1P05546 499 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 EPHX1P07099 455 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 ADRA2AP08913 450 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 LIMS3P0CW19 117 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 LIMS4P0CW20 117 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 MAGP20916 626 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 SLC6A1P30531 599 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 ACSL1P33121 698 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 ETV5P41161 510 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 ETV1P50549 477 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 CDH11P55287 796 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 P2RX3P56373 397 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 TAS2R38P59533 333 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 ST8SIA6P61647 398 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 GALK2Q01415 458 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 MC1RQ01726 317 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 SLAMF1Q13291 335 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 CEBPEQ15744 281 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 CARTPTQ16568 116 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 C21orf62-AS1Q17RA5 79 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 ZSWIM7Q19AV6 140 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 WSCD2Q2TBF2 565 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 COL28A1Q2UY09 1125 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 ESCO2Q56NI9 601 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 AADACL4Q5VUY2 407 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 FAM46CQ5VWP2 391 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 CD276Q5ZPR3 534 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 PYHIN1Q6K0P9 492 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 TNFAIP8L2Q6P589 184 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-225ENST00000545920 CNIH2Q6PI25 160 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 LILRA6Q6PI73 481 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 TMEM107Q6UX40 140 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 RFLNAQ6ZTI6 216 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 TRILQ7L0X0 811 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 LUZP2Q86TE4 346 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 TRAPPC5Q8IUR0 188 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 CCDC28AQ8IWP9 274 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 DMRTC2Q8IXT2 367 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-225ENST00000545920 CFAP206Q8IYR0 622 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 RNF113BQ8IZP6 322 aaKnown RBP6.06□□□□□ -1.44
SNHG1-225ENST00000545920 HDDC3Q8N4P3 179 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 MS4A15Q8N5U1 240 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 EID2Q8N6I1 236 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 LRRC17Q8N6Y2 441 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 YIPF7Q8N8F6 280 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 KCT2Q8NC54 265 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 CHST14Q8NCH0 376 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 ATP6V1C2Q8NEY4 427 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 OR5M3Q8NGP4 307 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 OR5AK3PQ8NH89 298 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 OR5K2Q8NHB8 316 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 NEIL3Q8TAT5 605 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 BRIX1Q8TDN6 353 aaKnown RBP6.06□□□□□ -1.44
SNHG1-225ENST00000545920 HAVCR2Q8TDQ0 301 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 UBASH3BQ8TF42 649 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 CYB5D2Q8WUJ1 264 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms