RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 AP3S1Q92572 193 aa14.78□□□□□ -0.04
LDLR-204ENST00000545707 SAMD8Q96LT4 415 aa14.78□□□□□ -0.04
LDLR-204ENST00000545707 MCHR1Q99705 422 aa14.78□□□□□ -0.04
LDLR-204ENST00000545707 ARHGDIGQ99819 225 aa14.78□□□□□ -0.04
LDLR-204ENST00000545707 GIMAP4Q9NUV9 329 aa14.78□□□□□ -0.04
LDLR-204ENST00000545707 TRDV1A0A1B0GX56 115 aa14.77□□□□□ -0.04
LDLR-204ENST00000545707 SEC14L5O43304 696 aa14.77□□□□□ -0.04
LDLR-204ENST00000545707 MAP2K3P46734 347 aa14.77□□□□□ -0.04
LDLR-204ENST00000545707 PRR5P85299 388 aa14.77□□□□□ -0.04
LDLR-204ENST00000545707 CCDC85BQ15834 202 aaPredicted RBP14.77□□□□□ -0.04
LDLR-204ENST00000545707 DUSP6Q16828 381 aa14.77□□□□□ -0.04
LDLR-204ENST00000545707 TMEM35AQ53FP2 167 aa14.77□□□□□ -0.04
LDLR-204ENST00000545707 C1orf53Q5VUE5 145 aa14.77□□□□□ -0.04
LDLR-204ENST00000545707 FAM111BQ6SJ93 734 aa14.77□□□□□ -0.04
LDLR-204ENST00000545707 PLET1Q6UQ28 207 aa14.77□□□□□ -0.04
LDLR-204ENST00000545707 GDF7Q7Z4P5 450 aa14.77□□□□□ -0.04
LDLR-204ENST00000545707 RAB42Q8N4Z0 105 aa14.77□□□□□ -0.04
LDLR-204ENST00000545707 SIRT6Q8N6T7 355 aa14.77□□□□□ -0.04
LDLR-204ENST00000545707 POGLUT1Q8NBL1 392 aa14.77□□□□□ -0.04
LDLR-204ENST00000545707 SMG7Q92540 1137 aaKnown RBP14.77□□□□□ -0.04
LDLR-204ENST00000545707 HDAC8Q9BY41 377 aa14.77□□□□□ -0.04
LDLR-204ENST00000545707 RNF32Q9H0A6 362 aa14.77□□□□□ -0.04
LDLR-204ENST00000545707 HINT3Q9NQE9 182 aaKnown RBP14.77□□□□□ -0.04
LDLR-204ENST00000545707 ACSL5Q9ULC5 683 aa14.77□□□□□ -0.04
LDLR-204ENST00000545707 GPSM3Q9Y4H4 160 aa14.77□□□□□ -0.04
LDLR-204ENST00000545707 KIAA0100Q14667 2235 aaKnown RBP14.77□□□□□ -0.04
LDLR-204ENST00000545707 LOC102723532A0A0G2JNH3 316 aa14.77□□□□□ -0.05
LDLR-204ENST00000545707 A0A1W2PP55 124 aa14.77□□□□□ -0.05
LDLR-204ENST00000545707 NFATC1O95644 943 aa14.77□□□□□ -0.05
LDLR-204ENST00000545707 MPIP34949 423 aa14.77□□□□□ -0.05
LDLR-204ENST00000545707 IFNGR2P38484 337 aa14.77□□□□□ -0.05
LDLR-204ENST00000545707 PPP3R1P63098 170 aa14.77□□□□□ -0.05
LDLR-204ENST00000545707 BTN3A2P78410 334 aa14.77□□□□□ -0.05
LDLR-204ENST00000545707 FZD5Q13467 585 aa14.77□□□□□ -0.05
LDLR-204ENST00000545707 GNA13Q14344 377 aa14.77□□□□□ -0.05
LDLR-204ENST00000545707 LRRC32Q14392 662 aa14.77□□□□□ -0.05
LDLR-204ENST00000545707 CCNJQ5T5M9 372 aa14.77□□□□□ -0.05
LDLR-204ENST00000545707 AGBL4Q5VU57 503 aa14.77□□□□□ -0.05
LDLR-204ENST00000545707 SMARCD3Q6STE5 483 aa14.77□□□□□ -0.05
LDLR-204ENST00000545707 OR2L5Q8NG80 312 aa14.77□□□□□ -0.05
LDLR-204ENST00000545707 OR2L3Q8NG85 312 aa14.77□□□□□ -0.05
LDLR-204ENST00000545707 TEX101Q9BY14 249 aa14.77□□□□□ -0.05
LDLR-204ENST00000545707 PITHD1Q9GZP4 211 aaPredicted RBP14.77□□□□□ -0.05
LDLR-204ENST00000545707 ENKD1Q9H0I2 346 aa14.77□□□□□ -0.05
LDLR-204ENST00000545707 CBLCQ9ULV8 474 aa14.77□□□□□ -0.05
LDLR-204ENST00000545707 ALG5Q9Y673 324 aa14.77□□□□□ -0.05
LDLR-204ENST00000545707 SIRT4Q9Y6E7 314 aaPredicted RBP14.77□□□□□ -0.05
LDLR-204ENST00000545707 SYNDIG1LA6NDD5 238 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 SMLR1H3BR10 107 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 PROM1O43490 865 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 DNAJB6O75190 326 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 ASGR2P07307 311 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 PKLRP30613 574 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 EVX1P49640 407 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 ANXA11P50995 505 aaKnown RBP14.76□□□□□ -0.05
LDLR-204ENST00000545707 AGERQ15109 404 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 THOC7Q6I9Y2 204 aaKnown RBP14.76□□□□□ -0.05
LDLR-204ENST00000545707 IL20RBQ6UXL0 311 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 TMEM91Q6ZNR0 172 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 NANOGNBQ7Z5D8 188 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 NR2C2APQ86WQ0 139 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 YIPF7Q8N8F6 280 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 SFXN5Q8TD22 340 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 CDS1Q92903 461 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 SLC41A3Q96GZ6 507 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 ZNF681Q96N22 645 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 GFM1Q96RP9 751 aaKnown RBP14.76□□□□□ -0.05
LDLR-204ENST00000545707 SOSTQ9BQB4 213 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 SLC7A7Q9UM01 511 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 ZFR2Q9UPR6 939 aaKnown RBP14.76□□□□□ -0.05
LDLR-204ENST00000545707 ATG2BQ96BY7 2078 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 SCO2O43819 266 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 HNRNPA1P09651 372 aaKnown RBP eCLIP14.76□□□□□ -0.05
LDLR-204ENST00000545707 DSG2Q14126 1118 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 PGGHGQ32M88 737 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 EOGTQ5NDL2 527 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 OR7G2Q8NG99 324 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 ADAMTS15Q8TE58 950 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 SMAP2Q8WU79 429 aaPredicted RBP14.76□□□□□ -0.05
LDLR-204ENST00000545707 ACOT11Q8WXI4 607 aaPredicted RBP14.76□□□□□ -0.05
LDLR-204ENST00000545707 GIMAP5Q96F15 307 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 ISYNA1Q9NPH2 558 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 IL20Q9NYY1 176 aa14.76□□□□□ -0.05
LDLR-204ENST00000545707 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.75□□□□□ -0.05
LDLR-204ENST00000545707 FAM240BA0A1B0GVZ2 78 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 PRG2P13727 222 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 MAT2AP31153 395 aaKnown RBP14.75□□□□□ -0.05
LDLR-204ENST00000545707 FAM27D1Q5T7N8 215 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 PLBD1Q6P4A8 553 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 SYCE2Q6PIF2 218 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 KLHL36Q8N4N3 616 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 HDDC3Q8N4P3 179 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 TTLQ8NG68 377 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 OR2L8Q8NGY9 312 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 OSTF1Q92882 214 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 RFKQ969G6 155 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 UPRTQ96BW1 309 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 WACQ9BTA9 647 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 PPIL3Q9H2H8 161 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms