RNA–Protein interactions for RNA: ENST00000545658.1

LRP6-207, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 435 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-207ENST00000545658 TRAF4Q9BUZ4 470 aaPredicted RBP3.44□□□□□ -1.86
LRP6-207ENST00000545658 NTMT1Q9BV86 223 aa3.44□□□□□ -1.86
LRP6-207ENST00000545658 RBM4Q9BWF3 364 aaKnown RBP3.44□□□□□ -1.86
LRP6-207ENST00000545658 KLHL4Q9C0H6 718 aa3.44□□□□□ -1.86
LRP6-207ENST00000545658 OPN3Q9H1Y3 402 aaPredicted RBP3.44□□□□□ -1.86
LRP6-207ENST00000545658 PROK2Q9HC23 129 aa3.44□□□□□ -1.86
LRP6-207ENST00000545658 PNO1Q9NRX1 252 aaKnown RBP3.44□□□□□ -1.86
LRP6-207ENST00000545658 HOMER3Q9NSC5 361 aa3.44□□□□□ -1.86
LRP6-207ENST00000545658 AIPL1Q9NZN9 384 aa3.44□□□□□ -1.86
LRP6-207ENST00000545658 KLHL8Q9P2G9 620 aaPredicted RBP3.44□□□□□ -1.86
LRP6-207ENST00000545658 CLCF1Q9UBD9 225 aa3.44□□□□□ -1.86
LRP6-207ENST00000545658 RUVBL2Q9Y230 463 aaKnown RBP3.44□□□□□ -1.86
LRP6-207ENST00000545658 DTX4Q9Y2E6 619 aa3.44□□□□□ -1.86
LRP6-207ENST00000545658 SLC22A7Q9Y694 548 aa3.44□□□□□ -1.86
LRP6-207ENST00000545658 VWFP04275 2813 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 hCG_2014768A0A024R1R8 64 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 GOLGA6L4A6NEF3 574 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 OR51F1A6NGY5 319 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 ZNF487B1APH4 448 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 H0Y3Z8 333 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 H3BNX3 289 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 TRIM77I1YAP6 450 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 GFYI3L273 518 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 RAB27BO00194 218 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 APOL1O14791 398 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 CLOCKO15516 846 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 RRP9O43818 475 aaKnown RBP3.43□□□□□ -1.86
LRP6-207ENST00000545658 TMPRSS11DO60235 418 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 SHOX2O60902 331 aaPredicted RBP3.43□□□□□ -1.86
LRP6-207ENST00000545658 AVILO75366 819 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 TRIM3O75382 744 aaPredicted RBP3.43□□□□□ -1.86
LRP6-207ENST00000545658 ACSL3O95573 720 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 FTCDO95954 541 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 TGFAP01135 160 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 C1QAP02745 245 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 HPNP05981 417 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 CRHP06850 196 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 SLC35G6P0C7Q6 338 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 CCDC172P0C7W6 258 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 MYBL1P10243 752 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 GZMAP12544 262 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 CPN1P15169 458 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 FERP16591 822 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 TBXA2RP21731 343 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 CHMP24386 653 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 KDELR1P24390 212 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 PPP2R1BP30154 601 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 FOXN2P32314 431 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 ADRA1AP35348 466 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 COILP38432 576 aaPredicted RBP3.43□□□□□ -1.86
LRP6-207ENST00000545658 NAGLUP54802 743 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 GEMP55040 296 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 TAS2R40P59535 323 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 SKP1P63208 163 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 ID2Q02363 134 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 LGALS3BPQ08380 585 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 TMED2Q15363 201 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 ZNF791Q3KP31 576 aaPredicted RBP3.43□□□□□ -1.86
LRP6-207ENST00000545658 ZNF672Q499Z4 452 aaPredicted RBP3.43□□□□□ -1.86
LRP6-207ENST00000545658 DEFB134Q4QY38 66 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 EIPR1Q53HC9 387 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 TCP11X2Q5H9J9 407 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.43□□□□□ -1.86
LRP6-207ENST00000545658 SLC22A10Q63ZE4 541 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 NIPAL1Q6NVV3 410 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 SCIMPQ6UWF3 145 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 PID1Q7Z2X4 250 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 ASPGQ86U10 573 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 GPSM1Q86YR5 675 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 GRAMD2AQ8IUY3 354 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 C11orf44Q8N8P7 122 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 CNEP1R1Q8N9A8 125 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 PPFIBP2Q8ND30 876 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 ZNF740Q8NDX6 193 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 NEK11Q8NG66 645 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 OR9A1PQ8NGU1 263 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 OR8K3Q8NH51 312 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 GABPB2Q8TAK5 448 aaPredicted RBP3.43□□□□□ -1.86
LRP6-207ENST00000545658 GSDMBQ8TAX9 411 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.43□□□□□ -1.86
LRP6-207ENST00000545658 C10orf105Q8TEF2 133 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 SKA2Q8WVK7 121 aaPredicted RBP3.43□□□□□ -1.86
LRP6-207ENST00000545658 TFB1MQ8WVM0 346 aaKnown RBP3.43□□□□□ -1.86
LRP6-207ENST00000545658 SLC13A3Q8WWT9 602 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 RAPGEF5Q92565 580 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 NEUROG1Q92886 237 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 CDKN2AIPNLQ96HQ2 116 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 ZNF597Q96LX8 424 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 ADAD1Q96M93 576 aaKnown RBP3.43□□□□□ -1.86
LRP6-207ENST00000545658 FOPNLQ96NB1 174 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 PRAP1Q96NZ9 151 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 KRT12Q99456 494 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 EBNA1BP2Q99848 306 aaKnown RBP3.43□□□□□ -1.86
LRP6-207ENST00000545658 DOHHQ9BU89 302 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 CARD6Q9BX69 1037 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 TSSK1BQ9BXA7 367 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 UBQLN3Q9H347 655 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 ADAP2Q9NPF8 381 aa3.43□□□□□ -1.86
LRP6-207ENST00000545658 NLE1Q9NVX2 485 aaPredicted RBP3.43□□□□□ -1.86
LRP6-207ENST00000545658 DDX56Q9NY93 547 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms